RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 TSC22D3Q99576 134 aa20.59■□□□□ 0.89
TTC39C-202ENST00000317571 TRPC7Q9HCX4 862 aa20.59■□□□□ 0.89
TTC39C-202ENST00000317571 UBA2Q9UBT2 640 aaPredicted RBP20.59■□□□□ 0.89
TTC39C-202ENST00000317571 PCDHGA7Q9Y5G6 932 aa20.59■□□□□ 0.89
TTC39C-202ENST00000317571 A0A1B0GTL3 188 aa20.59■□□□□ 0.89
TTC39C-202ENST00000317571 KPNA1P52294 538 aaPredicted RBP20.59■□□□□ 0.89
TTC39C-202ENST00000317571 CDH4P55283 916 aa20.59■□□□□ 0.89
TTC39C-202ENST00000317571 FOXA1P55317 472 aa20.59■□□□□ 0.89
TTC39C-202ENST00000317571 HERVK_113P63132 956 aa20.59■□□□□ 0.89
TTC39C-202ENST00000317571 SMARCB1Q12824 385 aa20.59■□□□□ 0.89
TTC39C-202ENST00000317571 NOGQ13253 232 aa20.59■□□□□ 0.89
TTC39C-202ENST00000317571 CYTH1Q15438 398 aa20.59■□□□□ 0.89
TTC39C-202ENST00000317571 ACBD5Q5T8D3 534 aaPredicted RBP20.59■□□□□ 0.89
TTC39C-202ENST00000317571 FOXB2Q5VYV0 432 aa20.59■□□□□ 0.89
TTC39C-202ENST00000317571 SLC8B1Q6J4K2 584 aa20.59■□□□□ 0.89
TTC39C-202ENST00000317571 MRNIPQ6NTE8 343 aa20.59■□□□□ 0.89
TTC39C-202ENST00000317571 PCDH20Q8N6Y1 951 aaKnown RBP20.59■□□□□ 0.89
TTC39C-202ENST00000317571 SPDYE1Q8NFV5 336 aaPredicted RBP20.59■□□□□ 0.89
TTC39C-202ENST00000317571 C2orf15Q8WU43 125 aaKnown RBP20.59■□□□□ 0.89
TTC39C-202ENST00000317571 FAR2Q96K12 515 aa20.59■□□□□ 0.89
TTC39C-202ENST00000317571 ATOH8Q96SQ7 321 aa20.59■□□□□ 0.89
TTC39C-202ENST00000317571 ERVK-6Q9BXR3 956 aa20.59■□□□□ 0.89
TTC39C-202ENST00000317571 GALPQ9UBC7 116 aa20.59■□□□□ 0.89
TTC39C-202ENST00000317571 ACOT8O14734 319 aa20.58■□□□□ 0.89
TTC39C-202ENST00000317571 STC2O76061 302 aa20.58■□□□□ 0.89
TTC39C-202ENST00000317571 F11P03951 625 aa20.58■□□□□ 0.89
TTC39C-202ENST00000317571 OGNP20774 298 aaKnown RBP20.58■□□□□ 0.89
TTC39C-202ENST00000317571 ELAVL2Q12926 359 aaKnown RBP20.58■□□□□ 0.89
TTC39C-202ENST00000317571 ART3Q13508 389 aa20.58■□□□□ 0.89
TTC39C-202ENST00000317571 FLOT2Q14254 428 aa20.58■□□□□ 0.89
TTC39C-202ENST00000317571 GSTA3Q16772 222 aa20.58■□□□□ 0.89
TTC39C-202ENST00000317571 THEMIS2Q5TEJ8 643 aa20.58■□□□□ 0.89
TTC39C-202ENST00000317571 LARP4Q71RC2 724 aaKnown RBP eCLIP20.58■□□□□ 0.89
TTC39C-202ENST00000317571 OR4K2Q8NGD2 314 aa20.58■□□□□ 0.89
TTC39C-202ENST00000317571 KLHL32Q96NJ5 620 aa20.58■□□□□ 0.89
TTC39C-202ENST00000317571 CYP2S1Q96SQ9 504 aa20.58■□□□□ 0.89
TTC39C-202ENST00000317571 CINPQ9BW66 212 aaPredicted RBP20.58■□□□□ 0.89
TTC39C-202ENST00000317571 KLHL4Q9C0H6 718 aa20.58■□□□□ 0.89
TTC39C-202ENST00000317571 RNF38Q9H0F5 515 aa20.58■□□□□ 0.89
TTC39C-202ENST00000317571 NLE1Q9NVX2 485 aaPredicted RBP20.58■□□□□ 0.89
TTC39C-202ENST00000317571 MTRRQ9UBK8 725 aa20.58■□□□□ 0.89
TTC39C-202ENST00000317571 GIMAP2Q9UG22 337 aa20.58■□□□□ 0.89
TTC39C-202ENST00000317571 SEPT3Q9UH03 358 aa20.58■□□□□ 0.89
TTC39C-202ENST00000317571 UBDO15205 165 aa20.58■□□□□ 0.88
TTC39C-202ENST00000317571 KDELR3O43731 214 aa20.58■□□□□ 0.88
TTC39C-202ENST00000317571 CDK14O94921 469 aa20.58■□□□□ 0.88
TTC39C-202ENST00000317571 CD160O95971 181 aa20.58■□□□□ 0.88
TTC39C-202ENST00000317571 FESP07332 822 aa20.58■□□□□ 0.88
TTC39C-202ENST00000317571 LYNP07948 512 aa20.58■□□□□ 0.88
TTC39C-202ENST00000317571 ALDOCP09972 364 aaKnown RBP20.58■□□□□ 0.88
TTC39C-202ENST00000317571 LPGAT1Q92604 370 aa20.58■□□□□ 0.88
TTC39C-202ENST00000317571 TUBGCP5Q96RT8 1024 aa20.58■□□□□ 0.88
TTC39C-202ENST00000317571 SERPINI1Q99574 410 aa20.58■□□□□ 0.88
TTC39C-202ENST00000317571 TMEM175Q9BSA9 504 aa20.58■□□□□ 0.88
TTC39C-202ENST00000317571 TDRD1Q9BXT4 1180 aaKnown RBP20.58■□□□□ 0.88
TTC39C-202ENST00000317571 HMX1Q9NP08 348 aaPredicted RBP20.58■□□□□ 0.88
TTC39C-202ENST00000317571 CCDC167Q9P0B6 97 aa20.58■□□□□ 0.88
TTC39C-202ENST00000317571 RIMKLBQ9ULI2 386 aa20.58■□□□□ 0.88
TTC39C-202ENST00000317571 PSMD13Q9UNM6 376 aa20.58■□□□□ 0.88
TTC39C-202ENST00000317571 SCAMP3O14828 347 aaKnown RBP20.57■□□□□ 0.88
TTC39C-202ENST00000317571 INSIG1O15503 277 aa20.57■□□□□ 0.88
TTC39C-202ENST00000317571 TSPAN3O60637 253 aa20.57■□□□□ 0.88
TTC39C-202ENST00000317571 TCN1P20061 433 aaPredicted RBP20.57■□□□□ 0.88
TTC39C-202ENST00000317571 CORO1AP31146 461 aaKnown RBP20.57■□□□□ 0.88
TTC39C-202ENST00000317571 OXCT1P55809 520 aa20.57■□□□□ 0.88
TTC39C-202ENST00000317571 LRP8Q14114 963 aa20.57■□□□□ 0.88
TTC39C-202ENST00000317571 FASTKQ14296 549 aaKnown RBP20.57■□□□□ 0.88
TTC39C-202ENST00000317571 SQLEQ14534 574 aa20.57■□□□□ 0.88
TTC39C-202ENST00000317571 FBXO48Q5FWF7 155 aa20.57■□□□□ 0.88
TTC39C-202ENST00000317571 C16orf59Q7L2K0 433 aa20.57■□□□□ 0.88
TTC39C-202ENST00000317571 LILRA2Q8N149 483 aa20.57■□□□□ 0.88
TTC39C-202ENST00000317571 PQLC1Q8N2U9 271 aa20.57■□□□□ 0.88
TTC39C-202ENST00000317571 BHLHE22Q8NFJ8 381 aaPredicted RBP20.57■□□□□ 0.88
TTC39C-202ENST00000317571 SEPT8Q92599 483 aa20.57■□□□□ 0.88
TTC39C-202ENST00000317571 NR1H4Q96RI1 486 aaPredicted RBP20.57■□□□□ 0.88
TTC39C-202ENST00000317571 SLC30A3Q99726 388 aa20.57■□□□□ 0.88
TTC39C-202ENST00000317571 CREBZFQ9NS37 354 aa20.57■□□□□ 0.88
TTC39C-202ENST00000317571 FAM50BQ9Y247 325 aa20.57■□□□□ 0.88
TTC39C-202ENST00000317571 PCDHGC4Q9Y5F7 938 aa20.57■□□□□ 0.88
TTC39C-202ENST00000317571 DNAJC15Q9Y5T4 150 aa20.57■□□□□ 0.88
TTC39C-202ENST00000317571 PENKP01210 267 aaPredicted RBP20.57■□□□□ 0.88
TTC39C-202ENST00000317571 AGKQ53H12 422 aa20.57■□□□□ 0.88
TTC39C-202ENST00000317571 OGFRL1Q5TC84 451 aaPredicted RBP20.57■□□□□ 0.88
TTC39C-202ENST00000317571 REP15Q6BDI9 236 aa20.57■□□□□ 0.88
TTC39C-202ENST00000317571 PAQR3Q6TCH7 311 aa20.57■□□□□ 0.88
TTC39C-202ENST00000317571 KCNA7Q96RP8 456 aa20.57■□□□□ 0.88
TTC39C-202ENST00000317571 NACA2Q9H009 215 aa20.57■□□□□ 0.88
TTC39C-202ENST00000317571 CACNA2D2Q9NY47 1150 aa20.57■□□□□ 0.88
TTC39C-202ENST00000317571 ANAPC1Q9H1A4 1944 aa20.56■□□□□ 0.88
TTC39C-202ENST00000317571 UBA6A0AVT1 1052 aaPredicted RBP20.56■□□□□ 0.88
TTC39C-202ENST00000317571 C2orf78A6NCI8 922 aa20.56■□□□□ 0.88
TTC39C-202ENST00000317571 E7ENX8 843 aa20.56■□□□□ 0.88
TTC39C-202ENST00000317571 PSMD12O00232 456 aaPredicted RBP20.56■□□□□ 0.88
TTC39C-202ENST00000317571 ZCCHC18P0CG32 403 aa20.56■□□□□ 0.88
TTC39C-202ENST00000317571 IRF1P10914 325 aa20.56■□□□□ 0.88
TTC39C-202ENST00000317571 ME2P23368 584 aa20.56■□□□□ 0.88
TTC39C-202ENST00000317571 HOXD10P28358 340 aa20.56■□□□□ 0.88
TTC39C-202ENST00000317571 FMO4P31512 558 aa20.56■□□□□ 0.88
TTC39C-202ENST00000317571 SLC11A2P49281 568 aa20.56■□□□□ 0.88
TTC39C-202ENST00000317571 PFKFB4Q16877 469 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms