RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 CHRM3P20309 590 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 IL10P22301 178 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 PSMA4P25789 261 aaKnown RBP13.45□□□□□ -0.26
SKA3-202ENST00000314759 SH3BP2P78314 561 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 INPP5AQ14642 412 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 ATP6AP1Q15904 470 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 ZNF792Q3KQV3 632 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 UNC50Q53HI1 259 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 GPR158Q5T848 1215 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 HECTD2Q5U5R9 776 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 MOB2Q70IA6 237 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 ISCA2Q86U28 154 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 CYGBQ8WWM9 190 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 CENPNQ96H22 339 aaPredicted RBP13.45□□□□□ -0.26
SKA3-202ENST00000314759 SLC39A8Q9C0K1 460 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 KATNBL1Q9H079 304 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 RBM22Q9NW64 420 aaKnown RBP eCLIP13.45□□□□□ -0.265e-6■■□□□ 13.6
SKA3-202ENST00000314759 HTR3EA5X5Y0 456 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 HSD17B1P14061 328 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 ZNF12P17014 697 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 CLCN5P51795 746 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 CDKN2DP55273 166 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 GNA12Q03113 381 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 PCSK7Q16549 785 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 LCN8Q6JVE9 175 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 LDB1Q86U70 411 aaPredicted RBP13.45□□□□□ -0.26
SKA3-202ENST00000314759 ADGRG5Q8IZF4 528 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 MINDY1Q8N5J2 469 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 SLC15A4Q8N697 577 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 L3HYPDHQ96EM0 354 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 FEM1CQ96JP0 617 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 MYRFLQ96LU7 910 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 DOK1Q99704 481 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 SOX17Q9H6I2 414 aaPredicted RBP13.45□□□□□ -0.26
SKA3-202ENST00000314759 ACTR3BQ9P1U1 418 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 VWA7Q9Y334 891 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 IPPQ9Y573 584 aa13.45□□□□□ -0.26
SKA3-202ENST00000314759 SOBPA7XYQ1 873 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 ADM5C9JUS6 153 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 PTGESO14684 152 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 RASAL1O95294 804 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 SLC6A2P23975 617 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 DCKP27707 260 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 GRB7Q14451 532 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 CYP2A13Q16696 494 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 ZNF362Q5T0B9 420 aaPredicted RBP13.44□□□□□ -0.26
SKA3-202ENST00000314759 EGFLAMQ63HQ2 1017 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 SPRED1Q7Z699 444 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 ZC3H7AQ8IWR0 971 aaKnown RBP13.44□□□□□ -0.26
SKA3-202ENST00000314759 CLYBLQ8N0X4 340 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 SMG8Q8ND04 991 aaKnown RBP13.44□□□□□ -0.26
SKA3-202ENST00000314759 HDAC10Q969S8 669 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 RPL10LQ96L21 214 aaKnown RBP13.44□□□□□ -0.26
SKA3-202ENST00000314759 ZFP42Q96MM3 310 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 C9orf16Q9BUW7 83 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 PRKD2Q9BZL6 878 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 TRIM15Q9C019 465 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 TBC1D13Q9NVG8 400 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.44□□□□□ -0.26
SKA3-202ENST00000314759 NDUFAF1Q9Y375 327 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 TRIM17Q9Y577 477 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 CLOCKO15516 846 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 SMPD1P17405 629 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 TRAF2Q12933 501 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 NEDD8Q15843 81 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 TMEM53Q6P2H8 277 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 SEPT8Q92599 483 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 TSPAN17Q96FV3 270 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 SENP8Q96LD8 212 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 DSEQ9UL01 958 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 OTOFQ9HC10 1997 aa13.44□□□□□ -0.26
SKA3-202ENST00000314759 TTC24A2A3L6 582 aaPredicted RBP13.43□□□□□ -0.26
SKA3-202ENST00000314759 EI24O14681 340 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 ANGPT2O15123 496 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 ARPC2O15144 300 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 WISP3O95389 354 aaPredicted RBP13.43□□□□□ -0.26
SKA3-202ENST00000314759 SNAI1O95863 264 aaPredicted RBP13.43□□□□□ -0.26
SKA3-202ENST00000314759 FOXA1P55317 472 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 BNIP2Q12982 314 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 SPIDRQ14159 915 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 SNX17Q15036 470 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 KCTD8Q6ZWB6 473 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 PIM3Q86V86 326 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 CILP2Q8IUL8 1156 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 TRPV3Q8NET8 790 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 ZNF420Q8TAQ5 688 aaPredicted RBP13.43□□□□□ -0.26
SKA3-202ENST00000314759 CHPT1Q8WUD6 406 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 PTERQ96BW5 349 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 DCPSQ96C86 337 aaKnown RBP13.43□□□□□ -0.26
SKA3-202ENST00000314759 FADS3Q9Y5Q0 445 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 RRN3P2A6NIE6 340 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 CCL22O00626 93 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 SULT1C4O75897 302 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 CDK14O94921 469 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 HOXD8P13378 290 aaPredicted RBP13.43□□□□□ -0.26
SKA3-202ENST00000314759 CDH3P22223 829 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 AXLP30530 894 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 POLR2IP36954 125 aaKnown RBP13.43□□□□□ -0.26
SKA3-202ENST00000314759 WNT3AP56704 352 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 HERVK_113P63132 956 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms