RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 OR4F21O95013 312 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 ALBP02768 609 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 ALPIP09923 528 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 POLR2LP62875 67 aaKnown RBP6.18□□□□□ -1.42
PRKDC-201ENST00000314191 RALGDSQ12967 914 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 TIGD2Q4W5G0 525 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 FEM1CQ96JP0 617 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 TJP1Q07157 1748 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 TBC1D3BA6NDS4 549 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 HAS3O00219 553 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 XYLBO75191 536 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 LRRC73Q5JTD7 316 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 SDE2Q6IQ49 451 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 CPNE9Q8IYJ1 553 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 ZNF555Q8NEP9 628 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 LPGAT1Q92604 370 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 KCTD14Q9BQ13 255 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-201ENST00000314191 UNC93B1Q9H1C4 597 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 KIF17Q9P2E2 1029 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 CDH22Q9UJ99 828 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 MGAT4DA6NG13 374 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 PPM1AP35813 382 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 CLCQ05315 142 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 FRG1Q14331 258 aaKnown RBP6.18□□□□□ -1.42
PRKDC-201ENST00000314191 TAGAPQ8N103 731 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 FBXO30Q8TB52 745 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 KHSRPQ92945 711 aaKnown RBP eCLIP6.18□□□□□ -1.421e-6■■■□□ 18.8
PRKDC-201ENST00000314191 CCT7Q99832 543 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 TRMOQ9BU70 441 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 CES1P23141 567 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 CSKP41240 450 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 ILF2Q12905 390 aaKnown RBP6.18□□□□□ -1.42
PRKDC-201ENST00000314191 RBFAQ8N0V3 343 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 MAGED4Q96JG8 741 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 CERS4Q9HA82 394 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 RPL26L1Q9UNX3 145 aaKnown RBP6.18□□□□□ -1.42
PRKDC-201ENST00000314191 TNPO3Q9Y5L0 923 aaKnown RBP6.18□□□□□ -1.42
PRKDC-201ENST00000314191 A0A0J9YYE9 177 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 PDZK1P1A8MUH7 402 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 RGS14O43566 566 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 DLX3O60479 287 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 MAGEC1O60732 1142 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 ZNF682O95780 498 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 CATP04040 527 aaKnown RBP6.18□□□□□ -1.42
PRKDC-201ENST00000314191 MAGEA11P43364 429 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 MAD2L1Q13257 205 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-201ENST00000314191 TRIM60Q495X7 471 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 NAT14Q8WUY8 206 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 GFM2Q969S9 779 aaKnown RBP6.18□□□□□ -1.42
PRKDC-201ENST00000314191 MED8Q96G25 268 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 TSGA13Q96PP4 275 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 OSGEPL1Q9H4B0 414 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 SLC7A8Q9UHI5 535 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 GNPTGQ9UJJ9 305 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-201ENST00000314191 PRAMEF1O95521 474 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 FGBP02675 491 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 ABRQ12979 859 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 SQLEQ14534 574 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 PKDCCQ504Y2 493 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 TXNDC11Q6PKC3 985 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 PAQR3Q6TCH7 311 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 TMCO2Q7Z6W1 182 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-201ENST00000314191 ADAMTSL2Q86TH1 951 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 ZNF296Q8WUU4 475 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-201ENST00000314191 ZNF184Q99676 751 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-201ENST00000314191 MRPS23Q9Y3D9 190 aaKnown RBP6.18□□□□□ -1.42
PRKDC-201ENST00000314191 MYH11P35749 1972 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 ABCB1P08183 1280 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-201ENST00000314191 SLC7A2P52569 658 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 CDC16Q13042 620 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 PAOXQ6QHF9 649 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 CAMK1DQ8IU85 385 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 PRR11Q96HE9 360 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-201ENST00000314191 GLUD1P00367 558 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 GPRIN3Q6ZVF9 776 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 ZC3HC1Q86WB0 502 aaKnown RBP6.18□□□□□ -1.42
PRKDC-201ENST00000314191 RTKNQ9BST9 563 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 TLL1O43897 1013 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 PGM3O95394 542 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 GSCP56915 257 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-201ENST00000314191 SCD5Q86SK9 330 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 NPWQ8N729 165 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 WDR60Q8WVS4 1066 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 ABTB1Q969K4 478 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-201ENST00000314191 SH3BP4Q9P0V3 963 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 WASF2Q9Y6W5 498 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 A0A1W2PRU2 124 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 KLF11O14901 512 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 MAFKO60675 156 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 UGT2B4P06133 528 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 S100A3P33764 101 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 GRIA3P42263 894 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 HSPA7P48741 367 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 TTC9BQ8N6N2 239 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 GJD2Q9UKL4 321 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 SCML2Q9UQR0 700 aa6.18□□□□□ -1.42
PRKDC-201ENST00000314191 H3BMM5 538 aa6.17□□□□□ -1.42
PRKDC-201ENST00000314191 PFDN1O60925 122 aa6.17□□□□□ -1.42
PRKDC-201ENST00000314191 LDLRP01130 860 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms