RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 ACSM2AQ08AH3 577 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 ZDHHC20Q5W0Z9 365 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 ACSM2BQ68CK6 577 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 TBC1D3GQ6DHY5 549 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 TBC1D3CQ6IPX1 549 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 TBC1D3Q8IZP1 549 aaPredicted RBP13.67□□□□□ -0.22
DDX54-202ENST00000314045 TAGAPQ8N103 731 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 SH3BP4Q9P0V3 963 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 KIF17Q9P2E2 1029 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 CCDC162PA2VCL2 907 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 FFAR3O14843 346 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 GPR42O15529 346 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 CPSF4O95639 269 aaKnown RBP13.67□□□□□ -0.22
DDX54-202ENST00000314045 GPC1P35052 558 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 NRIP1P48552 1158 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 ELP6Q0PNE2 266 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 WASHC5Q12768 1159 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 SLC10A2Q12908 348 aaPredicted RBP13.67□□□□□ -0.22
DDX54-202ENST00000314045 QPCTQ16769 361 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 MBLAC2Q68D91 279 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 ALKAL1Q6UXT8 129 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 RNF148Q8N7C7 305 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 CNDP1Q96KN2 507 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 SIGLEC10Q96LC7 697 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 GAS2L1Q99501 681 aaPredicted RBP13.67□□□□□ -0.22
DDX54-202ENST00000314045 SMG9Q9H0W8 520 aaKnown RBP13.67□□□□□ -0.22
DDX54-202ENST00000314045 AHSPQ9NZD4 102 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 SLC17A6Q9P2U8 582 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 ANKRD31Q8N7Z5 1873 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 CXorf49A8MYA2 514 aaPredicted RBP13.67□□□□□ -0.22
DDX54-202ENST00000314045 PSMD12O00232 456 aaPredicted RBP13.67□□□□□ -0.22
DDX54-202ENST00000314045 RGS14O43566 566 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 FSHRP23945 695 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 DDX6P26196 483 aaKnown RBP eCLIP13.67□□□□□ -0.22
DDX54-202ENST00000314045 GSCP56915 257 aaPredicted RBP13.67□□□□□ -0.22
DDX54-202ENST00000314045 GPX6P59796 221 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 USP46P62068 366 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 SCAPQ12770 1279 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 TAF1AQ15573 450 aaPredicted RBP13.67□□□□□ -0.22
DDX54-202ENST00000314045 FAM124AQ86V42 546 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 ZMIZ2Q8NF64 920 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 TSGA13Q96PP4 275 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 TRMOQ9BU70 441 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 SLC25A23Q9BV35 468 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 CROTQ9UKG9 612 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 TMCO1Q9UM00 188 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 SORCS3Q9UPU3 1222 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 ARL5AQ9Y689 179 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 COL4A5P29400 1685 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 EEF1DP29692 281 aaKnown RBP13.66□□□□□ -0.22
DDX54-202ENST00000314045 PSMD8P48556 350 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 SERINC3Q13530 473 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 GALNT4Q8N4A0 578 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 ASZ1Q8WWH4 475 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 WRAP53Q9BUR4 548 aaKnown RBP13.66□□□□□ -0.22
DDX54-202ENST00000314045 SSU72Q9NP77 194 aaKnown RBP13.66□□□□□ -0.22
DDX54-202ENST00000314045 ACSS2Q9NR19 701 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 OR51F1A6NGY5 319 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 EIF4E1BA6NMX2 242 aaKnown RBP13.66□□□□□ -0.22
DDX54-202ENST00000314045 MEI4A8MW99 385 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 FAM189A1O60320 539 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 ULK1O75385 1050 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 PROCP04070 461 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 HSPA1AP0DMV8 641 aaKnown RBP13.66□□□□□ -0.22
DDX54-202ENST00000314045 HSPA1BP0DMV9 641 aaKnown RBP13.66□□□□□ -0.22
DDX54-202ENST00000314045 KRT72Q14CN4 511 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 SIX1Q15475 284 aaPredicted RBP13.66□□□□□ -0.22
DDX54-202ENST00000314045 PM20D1Q6GTS8 502 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 CRTC3Q6UUV7 619 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 GPRIN3Q6ZVF9 776 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 CLYBLQ8N0X4 340 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 HEXDCQ8WVB3 486 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 KNL1Q8NG31 2342 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 A0A0D9SEW6 157 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 TMEM189-UBE2V1I3L0A0 370 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 AZIN1O14977 448 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 DCLK1O15075 740 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 RNASEH2AO75792 299 aaKnown RBP13.66□□□□□ -0.22
DDX54-202ENST00000314045 IPO13O94829 963 aaKnown RBP13.66□□□□□ -0.22
DDX54-202ENST00000314045 SLC1A2P43004 574 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 RAB33AQ14088 237 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 FRG1Q14331 258 aaKnown RBP13.66□□□□□ -0.22
DDX54-202ENST00000314045 LRRC73Q5JTD7 316 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 SIRPB2Q5JXA9 342 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 TXNDC11Q6PKC3 985 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 SERPINA9Q86WD7 417 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 BANPQ8N9N5 519 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 MTFMTQ96DP5 389 aaKnown RBP13.66□□□□□ -0.22
DDX54-202ENST00000314045 SUV39H2Q9H5I1 410 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 KCTD5Q9NXV2 234 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 EVPLQ92817 2033 aa13.66□□□□□ -0.22
DDX54-202ENST00000314045 PRAMEF11O60813 436 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 CDC16Q13042 620 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 PRKD1Q15139 912 aaPredicted RBP13.65□□□□□ -0.22
DDX54-202ENST00000314045 RAB30Q15771 203 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 CPSF6Q16630 551 aaKnown RBP eCLIP13.65□□□□□ -0.22
DDX54-202ENST00000314045 CARD16Q5EG05 197 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 LY6G5CQ5SRR4 150 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 CLEC4FQ8N1N0 589 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 TNIP2Q8NFZ5 429 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms