RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 AASDHPPTQ9NRN7 309 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 ZDHHC18Q9NUE0 388 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 SETD1AO15047 1707 aaKnown RBP13.17□□□□□ -0.3
SNED1-201ENST00000310397 SPATA31C2B4DYI2 1134 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 ITGB5P18084 799 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 WSCD1Q658N2 575 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 ERICH5Q6P6B1 374 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 UNC5BQ8IZJ1 945 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 GBA3Q9H227 469 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 ZNF221Q9UK13 617 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 IGFBP5P24593 272 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 ZNF157P51786 506 aaPredicted RBP13.17□□□□□ -0.3
SNED1-201ENST00000310397 CCNYL2Q5T2Q4 361 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 ARMC8Q8IUR7 673 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 RBFAQ8N0V3 343 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 UBR7Q8N806 425 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 OSGEPL1Q9H4B0 414 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 ST3GAL5Q9UNP4 418 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 STXBP5LQ9Y2K9 1186 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 GSAPA4D1B5 854 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 WNT10BO00744 389 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 SNHG28P0DPA3 235 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 ACAP2Q15057 778 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 TIGD2Q4W5G0 525 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 PPP1R26Q5T8A7 1209 aaPredicted RBP13.16□□□□□ -0.3
SNED1-201ENST00000310397 GLYATQ6IB77 296 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 NODALQ96S42 347 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 BCL9LQ86UU0 1499 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 PLIN3O60664 434 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 TSPAN8P19075 237 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 CAPSQ13938 189 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 TNFAIP8L3Q5GJ75 292 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 PTCHD4Q6ZW05 846 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 GATAD2AQ86YP4 633 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 SVOPLQ8N434 492 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 CBR4Q8N4T8 237 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 LPGAT1Q92604 370 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 CPXM1Q96SM3 734 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 CCDC3Q9BQI4 270 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 EBF3Q9H4W6 596 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 EIF2B3Q9NR50 452 aaKnown RBP13.16□□□□□ -0.3
SNED1-201ENST00000310397 GIN1Q9NXP7 522 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 PRMT5O14744 637 aaPredicted RBP13.16□□□□□ -0.3
SNED1-201ENST00000310397 IDH3AP50213 366 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 ZC3H7AQ8IWR0 971 aaKnown RBP13.16□□□□□ -0.3
SNED1-201ENST00000310397 PGBD3Q8N328 593 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 TINF2Q9BSI4 451 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 NXF3Q9H4D5 531 aaKnown RBP13.16□□□□□ -0.3
SNED1-201ENST00000310397 ATP13A3Q9H7F0 1226 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 ADARB2Q9NS39 739 aaKnown RBP13.16□□□□□ -0.3
SNED1-201ENST00000310397 CMTM6Q9NX76 183 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 FFAR3O14843 346 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 GPR42O15529 346 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 FAM155BO75949 473 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 ANGPTL1O95841 491 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 COPZ1P61923 177 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 FAM171A1Q5VUB5 890 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 RAB43Q86YS6 212 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 PTCH2Q9Y6C5 1203 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 C4BPAP04003 597 aaKnown RBP13.16□□□□□ -0.3
SNED1-201ENST00000310397 FCGRTP55899 365 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 IQSEC1Q6DN90 963 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 AHI1Q8N157 1196 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 DNMT3LQ9UJW3 386 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 LYVE1Q9Y5Y7 322 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 IRAK3Q9Y616 596 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 PLOD3O60568 738 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 CBX3Q13185 183 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 LSM12Q3MHD2 195 aaKnown RBP13.16□□□□□ -0.3
SNED1-201ENST00000310397 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.16□□□□□ -0.3
SNED1-201ENST00000310397 SPPL2CQ8IUH8 684 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 LINGO1Q96FE5 620 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 CIPCQ9C0C6 399 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 TLL2Q9Y6L7 1015 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 RIOX2Q8IUF8 465 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 ARL10Q8N8L6 244 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 ZNF222Q9UK12 451 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 OGDHLQ9ULD0 1010 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 PEAK1Q9H792 1746 aa13.16□□□□□ -0.3
SNED1-201ENST00000310397 ELOVL7A1L3X0 281 aa13.15□□□□□ -0.3
SNED1-201ENST00000310397 STK25O00506 426 aa13.15□□□□□ -0.3
SNED1-201ENST00000310397 PGRMC2O15173 223 aa13.15□□□□□ -0.3
SNED1-201ENST00000310397 TBX10O75333 385 aa13.15□□□□□ -0.3
SNED1-201ENST00000310397 CKBP12277 381 aa13.15□□□□□ -0.3
SNED1-201ENST00000310397 BMP7P18075 431 aa13.15□□□□□ -0.3
SNED1-201ENST00000310397 SNRPD1P62314 119 aaKnown RBP13.15□□□□□ -0.3
SNED1-201ENST00000310397 EN1Q05925 392 aaPredicted RBP13.15□□□□□ -0.3
SNED1-201ENST00000310397 BSNDQ8WZ55 320 aa13.15□□□□□ -0.3
SNED1-201ENST00000310397 PIGUQ9H490 435 aa13.15□□□□□ -0.3
SNED1-201ENST00000310397 PIK3C2AO00443 1686 aa13.15□□□□□ -0.3
SNED1-201ENST00000310397 MPZL2O60487 215 aa13.15□□□□□ -0.3
SNED1-201ENST00000310397 KLHL18O94889 574 aa13.15□□□□□ -0.3
SNED1-201ENST00000310397 TNFSF9P41273 254 aa13.15□□□□□ -0.3
SNED1-201ENST00000310397 MAPK9P45984 424 aa13.15□□□□□ -0.3
SNED1-201ENST00000310397 HSPA14Q0VDF9 509 aa13.15□□□□□ -0.3
SNED1-201ENST00000310397 NEK5Q6P3R8 708 aa13.15□□□□□ -0.3
SNED1-201ENST00000310397 XYLT1Q86Y38 959 aa13.15□□□□□ -0.3
SNED1-201ENST00000310397 HTRA1Q92743 480 aa13.15□□□□□ -0.3
SNED1-201ENST00000310397 CARNS1A5YM72 827 aa13.15□□□□□ -0.3
SNED1-201ENST00000310397 NPHS1O60500 1241 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms