RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 ATP5F1P24539 256 aaPredicted RBP21.23■□□□□ 0.99
ATG4D-201ENST00000309469 GKP32189 559 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 STK19P49842 368 aaPredicted RBP21.23■□□□□ 0.99
ATG4D-201ENST00000309469 FAM91A1Q658Y4 838 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 FAM109BQ6ICB4 259 aaPredicted RBP21.23■□□□□ 0.99
ATG4D-201ENST00000309469 MAVSQ7Z434 540 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 TTC7BQ86TV6 843 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 RBM23Q86U06 439 aaKnown RBP21.23■□□□□ 0.99
ATG4D-201ENST00000309469 RYBPQ8N488 228 aaPredicted RBP21.23■□□□□ 0.99
ATG4D-201ENST00000309469 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.23■□□□□ 0.99
ATG4D-201ENST00000309469 OR2AP1Q8NGE2 309 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 MOCOSQ96EN8 888 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 GPR63Q9BZJ6 419 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 ATP13A3Q9H7F0 1226 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 TLE6Q9H808 572 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 SPHK2Q9NRA0 654 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 DNAJC28Q9NX36 388 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 IL17CQ9P0M4 197 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 ZMYM5Q9UJ78 669 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 HS3ST2Q9Y278 367 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 HCFC2Q9Y5Z7 792 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 UBA6A0AVT1 1052 aaPredicted RBP21.23■□□□□ 0.99
ATG4D-201ENST00000309469 CCDC22O60826 627 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 ALPIP09923 528 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 HNRNPH1P31943 449 aaKnown RBP21.23■□□□□ 0.99
ATG4D-201ENST00000309469 CDKN1CP49918 316 aaPredicted RBP21.23■□□□□ 0.99
ATG4D-201ENST00000309469 ELF3P78545 371 aaPredicted RBP21.23■□□□□ 0.99
ATG4D-201ENST00000309469 PFKPQ01813 784 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 GPM6BQ13491 265 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 PEX6Q13608 980 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 RCN2Q14257 317 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 KRT72Q14CN4 511 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 LYSMD3Q7Z3D4 306 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 ILKAPQ9H0C8 392 aaPredicted RBP21.23■□□□□ 0.99
ATG4D-201ENST00000309469 CDH19Q9H159 772 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 LRMDAQ9H2I8 198 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 ACSS2Q9NR19 701 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 ARL8BQ9NVJ2 186 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 PKP3Q9Y446 797 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 HELZP42694 1942 aaKnown RBP21.22■□□□□ 0.99
ATG4D-201ENST00000309469 POU2F2P09086 479 aa21.22■□□□□ 0.99
ATG4D-201ENST00000309469 CEBPBP17676 345 aa21.22■□□□□ 0.99
ATG4D-201ENST00000309469 FMO4P31512 558 aa21.22■□□□□ 0.99
ATG4D-201ENST00000309469 HMGCLP35914 325 aa21.22■□□□□ 0.99
ATG4D-201ENST00000309469 IDH3AP50213 366 aa21.22■□□□□ 0.99
ATG4D-201ENST00000309469 RASSF2P50749 326 aa21.22■□□□□ 0.99
ATG4D-201ENST00000309469 DNAJB13P59910 316 aa21.22■□□□□ 0.99
ATG4D-201ENST00000309469 SNRPD1P62314 119 aaKnown RBP21.22■□□□□ 0.99
ATG4D-201ENST00000309469 USP4Q13107 963 aa21.22■□□□□ 0.99
ATG4D-201ENST00000309469 C9orf50Q5SZB4 431 aa21.22■□□□□ 0.99
ATG4D-201ENST00000309469 PIANPQ8IYJ0 282 aa21.22■□□□□ 0.99
ATG4D-201ENST00000309469 TXNDC5Q8NBS9 432 aaKnown RBP21.22■□□□□ 0.99
ATG4D-201ENST00000309469 ING5Q8WYH8 240 aa21.22■□□□□ 0.99
ATG4D-201ENST00000309469 INPP5DQ92835 1189 aa21.22■□□□□ 0.99
ATG4D-201ENST00000309469 ISG20Q96AZ6 181 aaKnown RBP21.22■□□□□ 0.99
ATG4D-201ENST00000309469 SLC7A6OSQ96CW6 309 aaPredicted RBP21.22■□□□□ 0.99
ATG4D-201ENST00000309469 EID2BQ96D98 161 aa21.22■□□□□ 0.99
ATG4D-201ENST00000309469 SAMD11Q96NU1 681 aa21.22■□□□□ 0.99
ATG4D-201ENST00000309469 TMEM237Q96Q45 408 aa21.22■□□□□ 0.99
ATG4D-201ENST00000309469 VPS9D1Q9Y2B5 631 aa21.22■□□□□ 0.99
ATG4D-201ENST00000309469 RAP2CQ9Y3L5 183 aa21.22■□□□□ 0.99
ATG4D-201ENST00000309469 MTF2Q9Y483 593 aaPredicted RBP21.22■□□□□ 0.99
ATG4D-201ENST00000309469 A0A0J9YYE9 177 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 PFDN6O15212 129 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 HNRNPCL1O60812 293 aaKnown RBP21.21■□□□□ 0.99
ATG4D-201ENST00000309469 TRBC1P01850 177 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 CHRNGP07510 517 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 PABPC1P11940 636 aaKnown RBP21.21■□□□□ 0.99
ATG4D-201ENST00000309469 TYRP14679 529 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 TCF3P15923 654 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 TUBB3Q13509 450 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 CBX2Q14781 532 aaPredicted RBP21.21■□□□□ 0.99
ATG4D-201ENST00000309469 ZRANB3Q5FWF4 1079 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 ARL13AQ5H913 290 aaPredicted RBP21.21■□□□□ 0.99
ATG4D-201ENST00000309469 LY6G5CQ5SRR4 150 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 PSAPL1Q6NUJ1 521 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 ADGRG2Q8IZP9 1017 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 PAF1Q8N7H5 531 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 ZNF557Q8N988 423 aaPredicted RBP21.21■□□□□ 0.99
ATG4D-201ENST00000309469 NSL1Q96IY1 281 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 MRPS23Q9Y3D9 190 aaKnown RBP21.21■□□□□ 0.99
ATG4D-201ENST00000309469 SRP72O76094 671 aaKnown RBP21.21■□□□□ 0.99
ATG4D-201ENST00000309469 SERPINA6P08185 405 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 TFEBP19484 476 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 SERPINA4P29622 427 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 TTPAP49638 278 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 XIAPP98170 497 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 MYLK3Q32MK0 819 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 ISCA2Q86U28 154 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 OTUB2Q96DC9 234 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 CCDC126Q96EE4 140 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 PTCD3Q96EY7 689 aaKnown RBP21.21■□□□□ 0.99
ATG4D-201ENST00000309469 CCDC68Q9H2F9 335 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 POMKQ9H5K3 350 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 ARMCX1Q9P291 453 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 LNPEPQ9UIQ6 1025 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 SLC25A13Q9UJS0 675 aa21.21■□□□□ 0.99
ATG4D-201ENST00000309469 APOBEC2Q9Y235 224 aaKnown RBP21.21■□□□□ 0.99
ATG4D-201ENST00000309469 FNDC3AQ9Y2H6 1198 aaKnown RBP21.21■□□□□ 0.99
ATG4D-201ENST00000309469 WNT6Q9Y6F9 365 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms