RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 TUBA1AQ71U36 451 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 B4GALNT4Q76KP1 1039 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 C1orf210Q8IVY1 113 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 SH2D3CQ8N5H7 860 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 CCDC33Q8N5R6 958 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 DTWD2Q8NBA8 298 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 MOSPD2Q8NHP6 518 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 CELF6Q96J87 481 aaKnown RBP8.3□□□□□ -1.08
CHD6-201ENST00000309279 RPL10LQ96L21 214 aaKnown RBP8.3□□□□□ -1.08
CHD6-201ENST00000309279 TLR10Q9BXR5 811 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 SMOC1Q9H4F8 434 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 EHD1Q9H4M9 534 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 RABEP2Q9H5N1 569 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 PDFQ9HBH1 243 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 CYP4F12Q9HCS2 524 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 ZDHHC4Q9NPG8 344 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 C2orf42Q9NWW7 574 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 CACNA2D2Q9NY47 1150 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 MAP4K5Q9Y4K4 846 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 STON1Q9Y6Q2 735 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 SHROOM3Q8TF72 1996 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 CACNA1HO95180 2353 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 A6NLC8 198 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 TXNL1O43396 289 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 DOK2O60496 412 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 PRAMEF11O60813 436 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 ZNF821O75541 412 aaPredicted RBP8.29□□□□□ -1.08
CHD6-201ENST00000309279 SNUPNO95149 360 aaKnown RBP8.29□□□□□ -1.08
CHD6-201ENST00000309279 RHOXF2BP0C7M4 288 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 SRCP12931 536 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 PRKCHP24723 683 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 HOXA6P31267 233 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 NNMTP40261 264 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 CXCL12P48061 93 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 STK19P49842 368 aaPredicted RBP8.29□□□□□ -1.08
CHD6-201ENST00000309279 SERPINH1P50454 418 aaKnown RBP8.29□□□□□ -1.08
CHD6-201ENST00000309279 CCR3P51677 355 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 DGKEP52429 567 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 ST8SIA6P61647 398 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 GALNT2Q10471 571 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 SLC10A2Q12908 348 aaPredicted RBP8.29□□□□□ -1.08
CHD6-201ENST00000309279 TFDP2Q14188 446 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 MAP7Q14244 749 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 NAA25Q14CX7 972 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 RPS6KA1Q15418 735 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 STK11Q15831 433 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 HNRNPA1L2Q32P51 320 aaKnown RBP8.29□□□□□ -1.08
CHD6-201ENST00000309279 SERPINA13PQ6UXR4 307 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 TMEM92Q6UXU6 159 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 BBS12Q6ZW61 710 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 TP53INP2Q8IXH6 220 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 MAML2Q8IZL2 1156 aaPredicted RBP8.29□□□□□ -1.08
CHD6-201ENST00000309279 TSEN2Q8NCE0 465 aaKnown RBP8.29□□□□□ -1.08
CHD6-201ENST00000309279 CASKIN2Q8WXE0 1202 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 TUBA1CQ9BQE3 449 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 RHOXF2Q9BQY4 288 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 OSBPL8Q9BZF1 889 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 CEP44Q9C0F1 390 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 TRIT1Q9H3H1 467 aaKnown RBP8.29□□□□□ -1.08
CHD6-201ENST00000309279 POLMQ9NP87 494 aaPredicted RBP8.29□□□□□ -1.08
CHD6-201ENST00000309279 PRMT8Q9NR22 394 aaPredicted RBP8.29□□□□□ -1.08
CHD6-201ENST00000309279 DTLQ9NZJ0 730 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 AASSQ9UDR5 926 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 SLC25A13Q9UJS0 675 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 CDC23Q9UJX2 597 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 CARD8Q9Y2G2 431 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 RAD54BQ9Y620 910 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 TARSL2A2RTX5 802 aaKnown RBP8.29□□□□□ -1.08
CHD6-201ENST00000309279 TTC34A8MYJ7 566 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 J3KR12 359 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 K7ESF4 209 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 DFFAO00273 331 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 EIF1AYO14602 144 aaKnown RBP8.29□□□□□ -1.08
CHD6-201ENST00000309279 APOL1O14791 398 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 SMAD6O43541 496 aaKnown RBP8.29□□□□□ -1.08
CHD6-201ENST00000309279 MFSD11O43934 449 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 CST8O60676 142 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 PEX11BO96011 259 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 PLATP00750 562 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 NPPAP01160 153 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 TDGF1P13385 188 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 HOXB2P14652 356 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 GARSP41250 739 aaKnown RBP8.29□□□□□ -1.08
CHD6-201ENST00000309279 NUMBP49757 651 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 PPARDQ03181 441 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 ZNF33AQ06730 810 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 IL10RBQ08334 325 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 CAMK2GQ13555 558 aaPredicted RBP8.29□□□□□ -1.08
CHD6-201ENST00000309279 DLG2Q15700 870 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 FNDC3BQ53EP0 1204 aaKnown RBP8.29□□□□□ -1.08
CHD6-201ENST00000309279 RPS26P11Q5JNZ5 115 aaPredicted RBP8.29□□□□□ -1.08
CHD6-201ENST00000309279 ZNF569Q5MCW4 686 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 C9orf64Q5T6V5 341 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 KIAA1211LQ6NV74 962 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 LINGO4Q6UY18 593 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 ARHGAP36Q6ZRI8 547 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 SPATA24Q86W54 205 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 RFX6Q8HWS3 928 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 CCDC50Q8IVM0 306 aa8.29□□□□□ -1.08
CHD6-201ENST00000309279 CAMKK1Q8N5S9 505 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms