RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 SCN8AQ9UQD0 1980 aa19.79■□□□□ 0.76
PDZRN3-202ENST00000308537 A0A087WV48 116 aa19.79■□□□□ 0.76
PDZRN3-202ENST00000308537 PRSS38A1L453 326 aa19.79■□□□□ 0.76
PDZRN3-202ENST00000308537 CAPN8A6NHC0 703 aa19.79■□□□□ 0.76
PDZRN3-202ENST00000308537 APOL1O14791 398 aa19.79■□□□□ 0.76
PDZRN3-202ENST00000308537 NOBOXO60393 691 aa19.79■□□□□ 0.76
PDZRN3-202ENST00000308537 NOP2P46087 812 aaKnown RBP19.79■□□□□ 0.76
PDZRN3-202ENST00000308537 CDK3Q00526 305 aa19.79■□□□□ 0.76
PDZRN3-202ENST00000308537 NRROSQ86YC3 692 aa19.79■□□□□ 0.76
PDZRN3-202ENST00000308537 PAF1Q8N7H5 531 aa19.79■□□□□ 0.76
PDZRN3-202ENST00000308537 ARL10Q8N8L6 244 aa19.79■□□□□ 0.76
PDZRN3-202ENST00000308537 ATL2Q8NHH9 583 aa19.79■□□□□ 0.76
PDZRN3-202ENST00000308537 MAPK15Q8TD08 544 aa19.79■□□□□ 0.76
PDZRN3-202ENST00000308537 SCAMP4Q969E2 229 aa19.79■□□□□ 0.76
PDZRN3-202ENST00000308537 AGAP2Q99490 1192 aa19.79■□□□□ 0.76
PDZRN3-202ENST00000308537 CEP41Q9BYV8 373 aa19.79■□□□□ 0.76
PDZRN3-202ENST00000308537 KCTD5Q9NXV2 234 aa19.79■□□□□ 0.76
PDZRN3-202ENST00000308537 PADI4Q9UM07 663 aa19.79■□□□□ 0.76
PDZRN3-202ENST00000308537 REXO2Q9Y3B8 237 aaKnown RBP19.79■□□□□ 0.76
PDZRN3-202ENST00000308537 HEY1Q9Y5J3 304 aa19.79■□□□□ 0.76
PDZRN3-202ENST00000308537 NTN3O00634 580 aaPredicted RBP19.78■□□□□ 0.76
PDZRN3-202ENST00000308537 CSO75390 466 aaKnown RBP19.78■□□□□ 0.76
PDZRN3-202ENST00000308537 TNFP01375 233 aa19.78■□□□□ 0.76
PDZRN3-202ENST00000308537 CTSEP14091 401 aa19.78■□□□□ 0.76
PDZRN3-202ENST00000308537 PECAM1P16284 738 aaPredicted RBP19.78■□□□□ 0.76
PDZRN3-202ENST00000308537 RPL26P61254 145 aaKnown RBP19.78■□□□□ 0.76
PDZRN3-202ENST00000308537 QPCTQ16769 361 aa19.78■□□□□ 0.76
PDZRN3-202ENST00000308537 ISXQ2M1V0 245 aa19.78■□□□□ 0.76
PDZRN3-202ENST00000308537 ZFYVE27Q5T4F4 411 aa19.78■□□□□ 0.76
PDZRN3-202ENST00000308537 B4GALNT4Q76KP1 1039 aa19.78■□□□□ 0.76
PDZRN3-202ENST00000308537 NLRP8Q86W28 1048 aa19.78■□□□□ 0.76
PDZRN3-202ENST00000308537 CCNYQ8ND76 341 aa19.78■□□□□ 0.76
PDZRN3-202ENST00000308537 EID2BQ96D98 161 aa19.78■□□□□ 0.76
PDZRN3-202ENST00000308537 SCARF2Q96GP6 870 aaPredicted RBP19.78■□□□□ 0.76
PDZRN3-202ENST00000308537 PCDH9Q9HC56 1237 aa19.78■□□□□ 0.76
PDZRN3-202ENST00000308537 CYP4F12Q9HCS2 524 aa19.78■□□□□ 0.76
PDZRN3-202ENST00000308537 DDX56Q9NY93 547 aaKnown RBP19.78■□□□□ 0.76
PDZRN3-202ENST00000308537 SAE1Q9UBE0 346 aaPredicted RBP19.78■□□□□ 0.76
PDZRN3-202ENST00000308537 CD84Q9UIB8 345 aa19.78■□□□□ 0.76
PDZRN3-202ENST00000308537 RPL26L1Q9UNX3 145 aaKnown RBP19.78■□□□□ 0.76
PDZRN3-202ENST00000308537 SLC17A4Q9Y2C5 497 aa19.78■□□□□ 0.76
PDZRN3-202ENST00000308537 TTLL3Q9Y4R7 772 aa19.78■□□□□ 0.76
PDZRN3-202ENST00000308537 PCDHA13Q9Y5I0 950 aa19.78■□□□□ 0.76
PDZRN3-202ENST00000308537 AHCTF1Q8WYP5 2266 aa19.77■□□□□ 0.76
PDZRN3-202ENST00000308537 A0A0A6YYK5 440 aaPredicted RBP19.77■□□□□ 0.76
PDZRN3-202ENST00000308537 PSTPIP1O43586 416 aa19.77■□□□□ 0.76
PDZRN3-202ENST00000308537 BRINP1O60477 761 aa19.77■□□□□ 0.76
PDZRN3-202ENST00000308537 KRT10P13645 584 aa19.77■□□□□ 0.76
PDZRN3-202ENST00000308537 ZNF30P17039 623 aa19.77■□□□□ 0.76
PDZRN3-202ENST00000308537 KELP23276 732 aa19.77■□□□□ 0.76
PDZRN3-202ENST00000308537 CD86P42081 329 aa19.77■□□□□ 0.76
PDZRN3-202ENST00000308537 ARHGEF7Q14155 803 aa19.77■□□□□ 0.76
PDZRN3-202ENST00000308537 PRKD1Q15139 912 aaPredicted RBP19.77■□□□□ 0.76
PDZRN3-202ENST00000308537 ZNF765Q7L2R6 523 aa19.77■□□□□ 0.76
PDZRN3-202ENST00000308537 C17orf82Q86X59 251 aaPredicted RBP19.77■□□□□ 0.76
PDZRN3-202ENST00000308537 GKN2Q86XP6 184 aa19.77■□□□□ 0.76
PDZRN3-202ENST00000308537 CCDC170Q8IYT3 715 aa19.77■□□□□ 0.76
PDZRN3-202ENST00000308537 GPBAR1Q8TDU6 330 aa19.77■□□□□ 0.76
PDZRN3-202ENST00000308537 NAT6Q93015 286 aa19.77■□□□□ 0.76
PDZRN3-202ENST00000308537 IMP4Q96G21 291 aaKnown RBP19.77■□□□□ 0.76
PDZRN3-202ENST00000308537 DEPDC7Q96QD5 511 aa19.77■□□□□ 0.76
PDZRN3-202ENST00000308537 CCDC3Q9BQI4 270 aa19.77■□□□□ 0.76
PDZRN3-202ENST00000308537 EVA1BQ9NVM1 165 aa19.77■□□□□ 0.76
PDZRN3-202ENST00000308537 SIRPGQ9P1W8 387 aa19.77■□□□□ 0.76
PDZRN3-202ENST00000308537 GPR34Q9UPC5 381 aa19.77■□□□□ 0.76
PDZRN3-202ENST00000308537 ENTPD2Q9Y5L3 495 aa19.77■□□□□ 0.76
PDZRN3-202ENST00000308537 A0A1W2PQM1 296 aa19.76■□□□□ 0.75
PDZRN3-202ENST00000308537 SOWAHDA6NJG2 315 aa19.76■□□□□ 0.75
PDZRN3-202ENST00000308537 ANKRD66B4E2M5 251 aa19.76■□□□□ 0.75
PDZRN3-202ENST00000308537 CLDN7O95471 211 aa19.76■□□□□ 0.75
PDZRN3-202ENST00000308537 NFKBIAP25963 317 aa19.76■□□□□ 0.75
PDZRN3-202ENST00000308537 POLD2P49005 469 aa19.76■□□□□ 0.75
PDZRN3-202ENST00000308537 PDK1Q15118 436 aa19.76■□□□□ 0.75
PDZRN3-202ENST00000308537 C19orf48Q6RUI8 117 aa19.76■□□□□ 0.75
PDZRN3-202ENST00000308537 ADAMTSL4Q6UY14 1074 aa19.76■□□□□ 0.75
PDZRN3-202ENST00000308537 SPOCD1Q6ZMY3 1216 aa19.76■□□□□ 0.75
PDZRN3-202ENST00000308537 RAVER1Q8IY67 606 aaKnown RBP19.76■□□□□ 0.75
PDZRN3-202ENST00000308537 LPCAT1Q8NF37 534 aa19.76■□□□□ 0.75
PDZRN3-202ENST00000308537 SNIP1Q8TAD8 396 aaKnown RBP19.76■□□□□ 0.75
PDZRN3-202ENST00000308537 KRT35Q92764 455 aa19.76■□□□□ 0.75
PDZRN3-202ENST00000308537 PRR11Q96HE9 360 aaPredicted RBP19.76■□□□□ 0.75
PDZRN3-202ENST00000308537 COX14Q96I36 57 aa19.76■□□□□ 0.75
PDZRN3-202ENST00000308537 PANX2Q96RD6 677 aa19.76■□□□□ 0.75
PDZRN3-202ENST00000308537 HERPUD2Q9BSE4 406 aa19.76■□□□□ 0.75
PDZRN3-202ENST00000308537 BRD8Q9H0E9 1235 aa19.76■□□□□ 0.75
PDZRN3-202ENST00000308537 PHPT1Q9NRX4 125 aaPredicted RBP19.76■□□□□ 0.75
PDZRN3-202ENST00000308537 CNOT6Q9ULM6 557 aaKnown RBP19.76■□□□□ 0.75
PDZRN3-202ENST00000308537 PCYT1BQ9Y5K3 369 aaPredicted RBP19.76■□□□□ 0.75
PDZRN3-202ENST00000308537 hCG_1818297A0A087WSY0 165 aa19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 PMS2P1A4D2B8 440 aa19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 SPOPO43791 374 aa19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 TCEA3O75764 348 aa19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 DXOO77932 396 aaKnown RBP19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 TNNT1P13805 278 aa19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 ZFXP17010 805 aaPredicted RBP19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 CD68P34810 354 aaPredicted RBP19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 RPIAP49247 311 aa19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 DYNLT1P63172 113 aa19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 AP1B1Q10567 949 aa19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 WASHC5Q12768 1159 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms