RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 MUC22E2RYF6 1773 aaPredicted RBP11.88□□□□□ -0.51
TRIM40-205ENST00000307859 SBK3P0C264 359 aa11.88□□□□□ -0.51
TRIM40-205ENST00000307859 KCNA5P22460 613 aa11.88□□□□□ -0.51
TRIM40-205ENST00000307859 CTSOP43234 321 aaPredicted RBP11.88□□□□□ -0.51
TRIM40-205ENST00000307859 PGGT1BP53609 377 aa11.88□□□□□ -0.51
TRIM40-205ENST00000307859 BCL2L1Q07817 233 aa11.88□□□□□ -0.51
TRIM40-205ENST00000307859 DLG1Q12959 904 aa11.88□□□□□ -0.51
TRIM40-205ENST00000307859 LY6G5CQ5SRR4 150 aa11.88□□□□□ -0.51
TRIM40-205ENST00000307859 FAM45BPQ6NSW5 357 aa11.88□□□□□ -0.51
TRIM40-205ENST00000307859 C22orf39Q6P5X5 142 aa11.88□□□□□ -0.51
TRIM40-205ENST00000307859 ZYG11AQ6WRX3 759 aa11.88□□□□□ -0.51
TRIM40-205ENST00000307859 LDB1Q86U70 411 aaPredicted RBP11.88□□□□□ -0.51
TRIM40-205ENST00000307859 CAMK1DQ8IU85 385 aa11.88□□□□□ -0.51
TRIM40-205ENST00000307859 FITM2Q8N6M3 262 aa11.88□□□□□ -0.51
TRIM40-205ENST00000307859 EFHBQ8N7U6 833 aa11.88□□□□□ -0.51
TRIM40-205ENST00000307859 PPP1R14CQ8TAE6 165 aa11.88□□□□□ -0.51
TRIM40-205ENST00000307859 ITFG1Q8TB96 612 aa11.88□□□□□ -0.51
TRIM40-205ENST00000307859 FAM45AQ8TCE6 357 aa11.88□□□□□ -0.51
TRIM40-205ENST00000307859 PDCD6IPQ8WUM4 868 aaKnown RBP11.88□□□□□ -0.51
TRIM40-205ENST00000307859 SLC2A11Q9BYW1 496 aa11.88□□□□□ -0.51
TRIM40-205ENST00000307859 CEP44Q9C0F1 390 aa11.88□□□□□ -0.51
TRIM40-205ENST00000307859 IRF2BPLQ9H1B7 796 aa11.88□□□□□ -0.51
TRIM40-205ENST00000307859 LINC00597Q9H2U6 94 aa11.88□□□□□ -0.51
TRIM40-205ENST00000307859 TLE6Q9H808 572 aa11.88□□□□□ -0.51
TRIM40-205ENST00000307859 SFXN1Q9H9B4 322 aa11.88□□□□□ -0.51
TRIM40-205ENST00000307859 KCNK13Q9HB14 408 aa11.88□□□□□ -0.51
TRIM40-205ENST00000307859 PIDD1Q9HB75 910 aa11.88□□□□□ -0.51
TRIM40-205ENST00000307859 SLC25A13Q9UJS0 675 aa11.88□□□□□ -0.51
TRIM40-205ENST00000307859 SLC12A4Q9UP95 1085 aa11.88□□□□□ -0.51
TRIM40-205ENST00000307859 WNT6Q9Y6F9 365 aa11.88□□□□□ -0.51
TRIM40-205ENST00000307859 TK2O00142 265 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 H2AFYO75367 372 aaKnown RBP11.87□□□□□ -0.51
TRIM40-205ENST00000307859 DCTN3O75935 186 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 UBOX5O94941 541 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 PIGNO95427 931 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 RALBP11234 206 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 FDXRP22570 491 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 SLC26A3P40879 764 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 ABL2P42684 1182 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 STK19P49842 368 aaPredicted RBP11.87□□□□□ -0.51
TRIM40-205ENST00000307859 SUOXP51687 545 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 KPNA2P52292 529 aaKnown RBP11.87□□□□□ -0.51
TRIM40-205ENST00000307859 PRKAA2P54646 552 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 EPHB1P54762 984 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 SNRPD1P62314 119 aaKnown RBP11.87□□□□□ -0.51
TRIM40-205ENST00000307859 SULT2A1Q06520 285 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 CBX2Q14781 532 aaPredicted RBP11.87□□□□□ -0.51
TRIM40-205ENST00000307859 ZNF549Q6P9A3 640 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 SDCCAG8Q86SQ7 713 aaPredicted RBP11.87□□□□□ -0.51
TRIM40-205ENST00000307859 CRLF3Q8IUI8 442 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 ADGRG2Q8IZP9 1017 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 FSTL5Q8N475 847 aaPredicted RBP11.87□□□□□ -0.51
TRIM40-205ENST00000307859 CELF5Q8N6W0 485 aaKnown RBP11.87□□□□□ -0.51
TRIM40-205ENST00000307859 PNPLA1Q8N8W4 532 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 OR6K2Q8NGY2 324 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 TTC8Q8TAM2 541 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 NXNL1Q96CM4 212 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 RPL10LQ96L21 214 aaKnown RBP11.87□□□□□ -0.51
TRIM40-205ENST00000307859 TUBGCP5Q96RT8 1024 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 TCF12Q99081 682 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 TNKS2Q9H2K2 1166 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 ATP13A3Q9H7F0 1226 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 ZNF395Q9H8N7 513 aaPredicted RBP11.87□□□□□ -0.51
TRIM40-205ENST00000307859 POPDC3Q9HBV1 291 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 IGSF5Q9NSI5 407 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 OXSMQ9NWU1 459 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 IL17CQ9P0M4 197 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 DCTN4Q9UJW0 460 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 RUVBL2Q9Y230 463 aaKnown RBP11.87□□□□□ -0.51
TRIM40-205ENST00000307859 VWA7Q9Y334 891 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 PLXNA2O75051 1894 aa11.87□□□□□ -0.51
TRIM40-205ENST00000307859 A0A0J9YYE9 177 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.86□□□□□ -0.51
TRIM40-205ENST00000307859 TMEM114B3SHH9 223 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 STX7O15400 261 aaKnown RBP11.86□□□□□ -0.51
TRIM40-205ENST00000307859 ITM2AO43736 263 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 FSBPO95073 299 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 TRBC1P01850 177 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 MYL2P10916 166 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 HMGCLP35914 325 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 NRIP1P48552 1158 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 SLC1A6P48664 564 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 CDKN2DP55273 166 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 ZP2Q05996 745 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 ACTN3Q08043 901 aaPredicted RBP11.86□□□□□ -0.51
TRIM40-205ENST00000307859 BNIP1Q12981 228 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 ITGA9Q13797 1035 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 SPDYAQ5MJ70 313 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 TBC1D1Q86TI0 1168 aaPredicted RBP11.86□□□□□ -0.51
TRIM40-205ENST00000307859 ADIPOR2Q86V24 386 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 AHI1Q8N157 1196 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 PCDH20Q8N6Y1 951 aaKnown RBP11.86□□□□□ -0.51
TRIM40-205ENST00000307859 C12orf76Q8N812 135 aaPredicted RBP11.86□□□□□ -0.51
TRIM40-205ENST00000307859 VN1R2Q8NFZ6 395 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 LPGAT1Q92604 370 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 ECHDC3Q96DC8 303 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 UBXN10Q96LJ8 280 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 LRRC3BQ96PB8 259 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 SORT1Q99523 831 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 MRPL57Q9BQC6 102 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms