RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 MASP1P48740 699 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 TBL3Q12788 808 aaKnown RBP10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 SCIMPQ6UWF3 145 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 FAM180AQ6UWF9 173 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 KYAT3Q6YP21 454 aaKnown RBP10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 MON1BQ7L1V2 547 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 ADCK1Q86TW2 530 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 ADCY4Q8NFM4 1077 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 GDPD5Q8WTR4 605 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 C12orf66Q96MD2 445 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 SEPHS2Q99611 448 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 MRTO4Q9UKD2 239 aaKnown RBP10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 OTCP00480 354 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 CA3P07451 260 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 RHOP08100 348 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 L1CAMP32004 1257 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 MRPS15P82914 257 aaKnown RBP10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 IL10RBQ08334 325 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 ADGRF1Q5T601 910 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 GPRIN3Q6ZVF9 776 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 FAM20CQ8IXL6 584 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 RTL3Q8N8U3 475 aaKnown RBP10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 FAM46DQ8NEK8 389 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 FAM237AA0A1B0GTK4 181 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 LRATO95237 230 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 MATN4O95460 622 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 GALTP07902 379 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 NR2F1P10589 423 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 ZNF24P17028 368 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 FEN1P39748 380 aaKnown RBP10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 MLLT3P42568 568 aaPredicted RBP10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 MSLNQ13421 630 aaPredicted RBP10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 TRIP10Q15642 601 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 CMTR2Q8IYT2 770 aaKnown RBP10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 KCTD4Q8WVF5 259 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 PCDHB18PQ96TA0 734 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 RCOR3Q9P2K3 495 aaPredicted RBP10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 HMGXB4Q9UGU5 601 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 CDK5RAP2Q96SN8 1893 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 LEFTY2O00292 366 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 COL9A3Q14050 684 aaPredicted RBP10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 SUN3Q8TAQ9 357 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 TFAP2BQ92481 460 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 WDR26Q9H7D7 661 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 C4AP0C0L4 1744 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 IQCF5A8MTL0 148 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 MATN3O15232 486 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 AVPR1BP47901 424 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 MFSD5Q6N075 450 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 TXNDC11Q6PKC3 985 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 BBS12Q6ZW61 710 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 PRSS58Q8IYP2 241 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 ZNF563Q8TA94 476 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 BAP1Q92560 729 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 EMID1Q96A84 441 aaPredicted RBP10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 MRPL57Q9BQC6 102 aaKnown RBP10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 LIMD1Q9UGP4 676 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 VPS4AQ9UN37 437 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 SCML2Q9UQR0 700 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 BTRCQ9Y297 605 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 H3BNH8 94 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 SEC24CP53992 1094 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 RPL6Q02878 288 aaKnown RBP10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 ZNF461Q8TAF7 563 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 ZCCHC10Q8TBK6 192 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 UTP15Q8TED0 518 aaKnown RBP10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 CNBD2Q96M20 576 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 HAPLN3Q96S86 360 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 CCDC134Q9H6E4 229 aa10.69□□□□□ -0.7
SYNPO2-201ENST00000307142 NEMP2A6NFY4 417 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 H3BN98 237 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 PIGNO95427 931 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 RPL3P39023 403 aaKnown RBP10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 PRMT9Q6P2P2 845 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 SLC30A9Q6PML9 568 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 NYAP1Q6ZVC0 841 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 MTDHQ86UE4 582 aaKnown RBP10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 ZNF280BQ86YH2 543 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 CMTM8Q8IZV2 173 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 CDYL2Q8N8U2 506 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 SLC22A17Q8WUG5 538 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 MARK4Q96L34 752 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 MAT2BQ9NZL9 334 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 MAPRE3Q9UPY8 281 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 SLX4Q8IY92 1834 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 KLF8O95600 359 aaPredicted RBP10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 TCEA1P23193 301 aaKnown RBP10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 ATXN1P54253 815 aaKnown RBP10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 OR4A15Q8NGL6 344 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 SPATA22Q8NHS9 363 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 EQTNQ9NQ60 294 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 CYP8B1Q9UNU6 501 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 TAF1P21675 1872 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 GRIN2DO15399 1336 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 PPEF2O14830 753 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 ZNF865P0CJ78 1059 aaPredicted RBP10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 NT5EP21589 574 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 SERPINB10P48595 397 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 NEK3P51956 506 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms