RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 RNF157Q96PX1 679 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 SNX13Q9Y5W8 968 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 IRAK3Q9Y616 596 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 TMEM150BA6NC51 233 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 TEX46H3BTG2 121 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 KMOO15229 486 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 CYB5AP00167 134 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 SLC5A3P53794 718 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 MRPS35P82673 323 aaKnown RBP8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 SPANXN2Q5MJ10 180 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 LDLRAP1Q5SW96 308 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 TCEAL6Q6IPX3 200 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 RBM23Q86U06 439 aaKnown RBP8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 SERINC5Q86VE9 423 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 HDAC7Q8WUI4 952 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 TEPSINQ96N21 525 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 PDP2Q9P2J9 529 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 MKL2Q9ULH7 1088 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 KCNE2Q9Y6J6 123 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 TNRC6CQ9HCJ0 1690 aaKnown RBP8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 LINC00854A0A1B0GVQ3 168 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 VGLL3A8MV65 326 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 ALADP13716 330 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 EDNRBP24530 442 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 S100A3P33764 101 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 RAB25P57735 213 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 TRIM25Q14258 630 aaKnown RBP8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 LRIG1Q96JA1 1093 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 TRIM51Q9BSJ1 452 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 SLC2A11Q9BYW1 496 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 SUSD2Q9UGT4 822 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 HES2Q9Y543 173 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 QSER1Q2KHR3 1735 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 KIAA1551Q9HCM1 1747 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 PAGE1O75459 146 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 LATS1O95835 1130 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 GIMD1P0DJR0 217 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 RPL22P35268 128 aaKnown RBP8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 MASP1P48740 699 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 IRX1P78414 480 aaPredicted RBP8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 BNIPLQ7Z465 357 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 ATCAYQ86WG3 371 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 GPSM1Q86YR5 675 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 METTL6Q8TCB7 284 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 HERVK_113Q902F9 699 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 ITCHQ96J02 903 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 C8orf33Q9H7E9 229 aaPredicted RBP8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 LYVE1Q9Y5Y7 322 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 FOCADQ5VW36 1801 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 TBC1D3DA0A087WVF3 549 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 TBC1D3IA0A087WXS9 549 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 TBC1D3EA0A087X179 549 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 TBC1D3KA0A087X1G2 549 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 TBC1D3FA6NER0 549 aaPredicted RBP8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 TRIM64A6NGJ6 449 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 TBC1D3LB9A6J9 549 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 DNALI1O14645 258 aaPredicted RBP8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 TMCC2O75069 709 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 C4BPAP04003 597 aaKnown RBP8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 TBC1D3HP0C7X1 549 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 OXTRP30559 389 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 IL12RB1P42701 662 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 GLRBP48167 497 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 TBC1D3GQ6DHY5 549 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 TBC1D3CQ6IPX1 549 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 GJB7Q6PEY0 223 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 RASSF6Q6ZTQ3 369 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 BBS12Q6ZW61 710 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 TBC1D3Q8IZP1 549 aaPredicted RBP8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 EMC1Q8N766 993 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 FIG4Q92562 907 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 SLC22A18Q96BI1 424 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 BCO2Q9BYV7 579 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 DNAJC18Q9H819 358 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 SCML2Q9UQR0 700 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 TRIOBPQ9H2D6 2365 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 VEGFBP49765 207 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 CCNIQ14094 377 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 ATP13A5Q4VNC0 1218 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 ATXN7L2Q5T6C5 722 aaPredicted RBP8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 PPP1R26Q5T8A7 1209 aaPredicted RBP8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 CACUL1Q86Y37 369 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 FAM126BQ8IXS8 530 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 AADATQ8N5Z0 425 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 ASB8Q9H765 288 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 MCCC2Q9HCC0 563 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 CMTM6Q9NX76 183 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 GSAPA4D1B5 854 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 WTIPA6NIX2 430 aaPredicted RBP8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 LILRB3O75022 631 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 ITGA2P17301 1181 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 CHN2P52757 468 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 CCZ1BP86790 482 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 CCZ1P86791 482 aaPredicted RBP8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 INO80DQ53TQ3 878 aaPredicted RBP8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 EARS2Q5JPH6 523 aaKnown RBP8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 SLC9A8Q9Y2E8 581 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 NDUFAF1Q9Y375 327 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 CACNA1CQ13936 2221 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms