RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 PPP1R2P1Q96PQ5 205 aa15.13■□□□□ 0.01
CSDC2-201ENST00000306149 MID1IP1Q9NPA3 183 aa15.13■□□□□ 0.01
CSDC2-201ENST00000306149 VPS45Q9NRW7 570 aa15.13■□□□□ 0.01
CSDC2-201ENST00000306149 POLR3BQ9NW08 1133 aaPredicted RBP15.13■□□□□ 0.01
CSDC2-201ENST00000306149 DNAJC15Q9Y5T4 150 aa15.13■□□□□ 0.01
CSDC2-201ENST00000306149 H3BMM5 538 aa15.13■□□□□ 0.01
CSDC2-201ENST00000306149 RHOQP17081 205 aa15.13■□□□□ 0.01
CSDC2-201ENST00000306149 CHRM3P20309 590 aa15.13■□□□□ 0.01
CSDC2-201ENST00000306149 HTR7P34969 479 aa15.13■□□□□ 0.01
CSDC2-201ENST00000306149 HUNKP57058 714 aa15.13■□□□□ 0.01
CSDC2-201ENST00000306149 GRB7Q14451 532 aa15.13■□□□□ 0.01
CSDC2-201ENST00000306149 SLC14A2Q15849 920 aa15.13■□□□□ 0.01
CSDC2-201ENST00000306149 UGT3A2Q3SY77 523 aa15.13■□□□□ 0.01
CSDC2-201ENST00000306149 VPS26BQ4G0F5 336 aa15.13■□□□□ 0.01
CSDC2-201ENST00000306149 NUP93Q8N1F7 819 aa15.13■□□□□ 0.01
CSDC2-201ENST00000306149 C1orf74Q96LT6 269 aa15.13■□□□□ 0.01
CSDC2-201ENST00000306149 RPRD1AQ96P16 312 aaPredicted RBP15.13■□□□□ 0.01
CSDC2-201ENST00000306149 MFSD1Q9H3U5 465 aa15.13■□□□□ 0.01
CSDC2-201ENST00000306149 THEGQ9P2T0 379 aa15.13■□□□□ 0.01
CSDC2-201ENST00000306149 BTRCQ9Y297 605 aa15.13■□□□□ 0.01
CSDC2-201ENST00000306149 CCDC162PA2VCL2 907 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 SRP72O76094 671 aaKnown RBP15.12■□□□□ 0.01
CSDC2-201ENST00000306149 CDK14O94921 469 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 SLC2A3P11169 496 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 GRIA3P42263 894 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 ECT2LQ008S8 904 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 POLD3Q15054 466 aaPredicted RBP15.12■□□□□ 0.01
CSDC2-201ENST00000306149 HMBOX1Q6NT76 420 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 DDIASQ8IXT1 998 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 CFAP52Q8N1V2 620 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 SMIM14Q96QK8 99 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 UHRF1Q96T88 793 aaPredicted RBP15.12■□□□□ 0.01
CSDC2-201ENST00000306149 SLC25A23Q9BV35 468 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 TRMT13Q9NUP7 481 aaKnown RBP15.12■□□□□ 0.01
CSDC2-201ENST00000306149 CD300AQ9UGN4 299 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 EGFL7Q9UHF1 273 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 NOD1Q9Y239 953 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 SLC27A5Q9Y2P5 690 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 RNF11Q9Y3C5 154 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 TCRBV3S1A0A5B6 114 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 WASH4PA8MWX3 477 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 PIP5K1BO14986 540 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 CD1DP15813 335 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 OR1G1P47890 313 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 NDST2P52849 883 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 INHBCP55103 352 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 IRF5Q13568 498 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 CAPRIN1Q14444 709 aaKnown RBP15.12■□□□□ 0.01
CSDC2-201ENST00000306149 DSC3Q14574 896 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 IRAK1BP1Q5VVH5 260 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 LRRC49Q8IUZ0 686 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 TRPC4APQ8TEL6 797 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 CANT1Q8WVQ1 401 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 RANBP9Q96S59 729 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 HAUS8Q9BT25 410 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 OSBPL11Q9BXB4 747 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 TMEM248Q9NWD8 314 aa15.12■□□□□ 0.01
CSDC2-201ENST00000306149 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.12■□□□□ 0.01
CSDC2-201ENST00000306149 A0A0J9YYE9 177 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 CD3EAPO15446 510 aaKnown RBP15.11■□□□□ 0.01
CSDC2-201ENST00000306149 WISP3O95389 354 aaPredicted RBP15.11■□□□□ 0.01
CSDC2-201ENST00000306149 GLP2RO95838 553 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 ASGR1P07306 291 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 LINC00032P0C843 101 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 UGT1A6P19224 532 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 RPL10P27635 214 aaKnown RBP15.11■□□□□ 0.01
CSDC2-201ENST00000306149 HERVK_113P63132 956 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 IKBKEQ14164 716 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 CST9Q5W186 159 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 CARM1Q86X55 608 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 DIS3LQ8TF46 1054 aaKnown RBP15.11■□□□□ 0.01
CSDC2-201ENST00000306149 RPL10LQ96L21 214 aaKnown RBP15.11■□□□□ 0.01
CSDC2-201ENST00000306149 ZNF512Q96ME7 567 aaPredicted RBP15.11■□□□□ 0.01
CSDC2-201ENST00000306149 ERVK-6Q9BXR3 956 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 TIMMDC1Q9NPL8 285 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 DDX18Q9NVP1 670 aaKnown RBP15.11■□□□□ 0.01
CSDC2-201ENST00000306149 TMEM181Q9P2C4 612 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 SCML2Q9UQR0 700 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 FAM50BQ9Y247 325 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 UBA6A0AVT1 1052 aaPredicted RBP15.11■□□□□ 0.01
CSDC2-201ENST00000306149 PLOD2O00469 737 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 TPST1O60507 370 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 PAPSS2O95340 614 aaPredicted RBP15.11■□□□□ 0.01
CSDC2-201ENST00000306149 ATP6V1B2P21281 511 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 GPX3P22352 226 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 SLC7A1P30825 629 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 OR1E1P30953 314 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 STX1BP61266 288 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 GALNT1Q10472 559 aaPredicted RBP15.11■□□□□ 0.01
CSDC2-201ENST00000306149 C10orf120Q5SQS8 335 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 FAM45BPQ6NSW5 357 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 C8orf82Q6P1X6 216 aaPredicted RBP15.11■□□□□ 0.01
CSDC2-201ENST00000306149 C17orf99Q6UX52 265 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 HACD2Q6Y1H2 254 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 FAM45AQ8TCE6 357 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 MAP10Q9P2G4 905 aa15.11■□□□□ 0.01
CSDC2-201ENST00000306149 CNOT6Q9ULM6 557 aaKnown RBP15.11■□□□□ 0.01
CSDC2-201ENST00000306149 FNDC3AQ9Y2H6 1198 aaKnown RBP15.11■□□□□ 0.01
CSDC2-201ENST00000306149 FAM149AA5PLN7 773 aa15.1■□□□□ 0.01
CSDC2-201ENST00000306149 RAMP2O60895 175 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms