RNA–Protein interactions for RNA: ENST00000304992.10

PRPF8-201, Transcript of pre-mRNA processing factor 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF8, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-201ENST00000304992 PTPN18Q99952 460 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 NIFKQ9BYG3 293 aaKnown RBP10.14□□□□□ -0.79
PRPF8-201ENST00000304992 RHOBTB2Q9BYZ6 727 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 SYN3O14994 580 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.14□□□□□ -0.79
PRPF8-201ENST00000304992 FSTL1Q12841 308 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 KPNB1Q14974 876 aaKnown RBP10.14□□□□□ -0.79
PRPF8-201ENST00000304992 C10orf107Q8IVU9 208 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 HDDC3Q8N4P3 179 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 CCDC185Q8N715 623 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 SPATA22Q8NHS9 363 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 METTL21AQ8WXB1 218 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 CD101Q93033 1021 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 SNX27Q96L92 541 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 ZNF354BQ96LW1 612 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 KLHL32Q96NJ5 620 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 VPS35Q96QK1 796 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 LMAN2LQ9H0V9 348 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 NCANO14594 1321 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 C15orf38-AP3S2A0A0A6YYH1 394 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 PRG2P13727 222 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 ARPINQ7Z6K5 226 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 GPR180Q86V85 440 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 OFCC1Q8IZS5 231 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 ZCCHC10Q8TBK6 192 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 CLP1Q92989 425 aaKnown RBP10.14□□□□□ -0.79
PRPF8-201ENST00000304992 OR52E6Q96RD3 313 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 SLC38A3Q99624 504 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 DGCR6LQ9BY27 220 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 NFKBIEO00221 500 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 RFXANKO14593 260 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 LYPLA2O95372 231 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 SNRPB2P08579 225 aaKnown RBP10.14□□□□□ -0.79
PRPF8-201ENST00000304992 SPAM1P38567 509 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 MASP1P48740 699 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 GNA12Q03113 381 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 ILF3Q12906 894 aaKnown RBP eCLIP10.14□□□□□ -0.79
PRPF8-201ENST00000304992 RAPSNQ13702 412 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 COL9A3Q14050 684 aaPredicted RBP10.14□□□□□ -0.79
PRPF8-201ENST00000304992 DENND6AQ8IWF6 608 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 ACBD6Q9BR61 282 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 TMCO1Q9UM00 188 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 AP3D1O14617 1153 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 TRIM24O15164 1050 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 NT5EP21589 574 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 SLC25A3Q00325 362 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 MYBPC1Q00872 1141 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 KLHL12Q53G59 568 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 TEX44Q53QW1 395 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 PPP1R15BQ5SWA1 713 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 TAC4Q86UU9 113 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 SCAMP5Q8TAC9 235 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 PHF10Q8WUB8 498 aaKnown RBP10.14□□□□□ -0.79
PRPF8-201ENST00000304992 POLMQ9NP87 494 aaPredicted RBP10.14□□□□□ -0.79
PRPF8-201ENST00000304992 MRPL39Q9NYK5 338 aaKnown RBP10.14□□□□□ -0.79
PRPF8-201ENST00000304992 STXBP5LQ9Y2K9 1186 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 ACTL7BQ9Y614 415 aa10.14□□□□□ -0.79
PRPF8-201ENST00000304992 LYPLA1O75608 230 aaPredicted RBP10.13□□□□□ -0.79
PRPF8-201ENST00000304992 PTPN9P43378 593 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 NAE1Q13564 534 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 UBAP2LQ14157 1087 aaKnown RBP10.13□□□□□ -0.79
PRPF8-201ENST00000304992 TEAD4Q15561 434 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 RSBN1Q5VWQ0 802 aaPredicted RBP10.13□□□□□ -0.79
PRPF8-201ENST00000304992 POTEHQ6S545 545 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 IRF2BP2Q7Z5L9 587 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 CENPIQ92674 756 aaPredicted RBP10.13□□□□□ -0.79
PRPF8-201ENST00000304992 TSSK3Q96PN8 268 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 LHX5Q9H2C1 402 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 ENOPH1Q9UHY7 261 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 ERVW-1Q9UQF0 538 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 COLEC10Q9Y6Z7 277 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 A0A1B0GW55 424 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 RPP40O75818 363 aaKnown RBP10.13□□□□□ -0.79
PRPF8-201ENST00000304992 RECQL5O94762 991 aaPredicted RBP10.13□□□□□ -0.79
PRPF8-201ENST00000304992 PRAMEF1O95521 474 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 KRT75O95678 551 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 DUX4L2P0CJ85 424 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 DUX4L3P0CJ86 424 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 DUX4L4P0CJ87 422 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 DUX4L5P0CJ88 424 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 DUX4L6P0CJ89 424 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 DUX4L7P0CJ90 424 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 H2AFXP16104 143 aaPredicted RBP10.13□□□□□ -0.79
PRPF8-201ENST00000304992 GDI1P31150 447 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 PDZK1Q5T2W1 519 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 AIF1LQ9BQI0 150 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 CNPPD1Q9BV87 410 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 DHX33Q9H6R0 707 aaKnown RBP10.13□□□□□ -0.79
PRPF8-201ENST00000304992 DUX4Q9UBX2 424 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 TP73O15350 636 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 OR10H3O60404 316 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 CCNDBP1O95273 360 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 AQP1P29972 269 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 IGFALSP35858 605 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 CYP4F3Q08477 520 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 ADHFE1Q8IWW8 467 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 RORBQ92753 470 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 SPATA5L1Q9BVQ7 753 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 LOC100506127A0A0U1RQW1 187 aa10.13□□□□□ -0.79
PRPF8-201ENST00000304992 PRMT5O14744 637 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms