RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 KCTD4Q8WVF5 259 aa12□□□□□ -0.49
TPM3-202ENST00000302206 SMG7Q92540 1137 aaKnown RBP12□□□□□ -0.49
TPM3-202ENST00000302206 RMDN2Q96LZ7 410 aa12□□□□□ -0.49
TPM3-202ENST00000302206 ZSWIM3Q96MP5 696 aa12□□□□□ -0.49
TPM3-202ENST00000302206 MRPL57Q9BQC6 102 aaKnown RBP12□□□□□ -0.49
TPM3-202ENST00000302206 KCNH6Q9H252 994 aa12□□□□□ -0.49
TPM3-202ENST00000302206 STN1Q9H668 368 aaKnown RBP12□□□□□ -0.49
TPM3-202ENST00000302206 SUDS3Q9H7L9 328 aaPredicted RBP12□□□□□ -0.49
TPM3-202ENST00000302206 PIDD1Q9HB75 910 aa12□□□□□ -0.49
TPM3-202ENST00000302206 ABCF3Q9NUQ8 709 aa12□□□□□ -0.49
TPM3-202ENST00000302206 ZNF358Q9NW07 568 aa12□□□□□ -0.49
TPM3-202ENST00000302206 OXSMQ9NWU1 459 aa12□□□□□ -0.49
TPM3-202ENST00000302206 EVLQ9UI08 416 aaPredicted RBP12□□□□□ -0.49
TPM3-202ENST00000302206 FBXO10Q9UK96 956 aa12□□□□□ -0.49
TPM3-202ENST00000302206 SLC12A4Q9UP95 1085 aa12□□□□□ -0.49
TPM3-202ENST00000302206 PPIL1Q9Y3C6 166 aa12□□□□□ -0.49
TPM3-202ENST00000302206 ZNF711Q9Y462 761 aa12□□□□□ -0.49
TPM3-202ENST00000302206 PCDHB9Q9Y5E1 797 aa12□□□□□ -0.49
TPM3-202ENST00000302206 COMMD10Q9Y6G5 202 aa12□□□□□ -0.49
TPM3-202ENST00000302206 ANKRD36A6QL64 1941 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 BRWD1Q9NSI6 2320 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 A0A0J9YYE9 177 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 OR51F1A6NGY5 319 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 WASH3PC4AMC7 463 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 NEDD8-MDP1E9PL57 170 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 HOXC11O43248 304 aaPredicted RBP11.99□□□□□ -0.49
TPM3-202ENST00000302206 DNAJC6O75061 913 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 ATP5HO75947 161 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 TRBC1P01850 177 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 RBP1P09455 135 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 LTA4HP09960 611 aaKnown RBP11.99□□□□□ -0.49
TPM3-202ENST00000302206 TYRP14679 529 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 SAT1P21673 171 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 PMLP29590 882 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 SLC8A1P32418 973 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 HMGCLP35914 325 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 SKIV2L2P42285 1042 aaKnown RBP11.99□□□□□ -0.49
TPM3-202ENST00000302206 ABL2P42684 1182 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 SLC1A6P48664 564 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 TTPAP49638 278 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 HK2P52789 917 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 ARFIP2P53365 341 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 ABCE1P61221 599 aaKnown RBP11.99□□□□□ -0.49
TPM3-202ENST00000302206 ECT2LQ008S8 904 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 ACTN3Q08043 901 aaPredicted RBP11.99□□□□□ -0.49
TPM3-202ENST00000302206 OVGP1Q12889 678 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 BNIP1Q12981 228 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 MYLK3Q32MK0 819 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 ZNF789Q5FWF6 425 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 DGKKQ5KSL6 1271 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 LY6G5CQ5SRR4 150 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 ASTLQ6HA08 431 aaPredicted RBP11.99□□□□□ -0.49
TPM3-202ENST00000302206 AHI1Q8N157 1196 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 FITM2Q8N6M3 262 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 RFWD2Q8NHY2 731 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 WFIKKN2Q8TEU8 576 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 PPP4R1Q8TF05 950 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 ECHDC3Q96DC8 303 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 CCDC126Q96EE4 140 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 UBXN10Q96LJ8 280 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 ZNF641Q96N77 438 aaPredicted RBP11.99□□□□□ -0.49
TPM3-202ENST00000302206 LRRC37BQ96QE4 947 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 LYSMD1Q96S90 227 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 OLFM1Q99784 485 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 AARSD1Q9BTE6 412 aaKnown RBP11.99□□□□□ -0.49
TPM3-202ENST00000302206 TM6SF2Q9BZW4 377 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 MRPL46Q9H2W6 279 aaKnown RBP11.99□□□□□ -0.49
TPM3-202ENST00000302206 KCNK13Q9HB14 408 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 CD320Q9NPF0 282 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 IGSF5Q9NSI5 407 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 POLR3BQ9NW08 1133 aaPredicted RBP11.99□□□□□ -0.49
TPM3-202ENST00000302206 OBP2AQ9NY56 170 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 IL17CQ9P0M4 197 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 PKP3Q9Y446 797 aa11.99□□□□□ -0.49
TPM3-202ENST00000302206 CCDC189A1A4V9 331 aa11.98□□□□□ -0.49
TPM3-202ENST00000302206 CAPN8A6NHC0 703 aa11.98□□□□□ -0.49
TPM3-202ENST00000302206 CCL22O00626 93 aa11.98□□□□□ -0.49
TPM3-202ENST00000302206 BUD23O43709 281 aaKnown RBP11.98□□□□□ -0.49
TPM3-202ENST00000302206 NDUFS3O75489 264 aa11.98□□□□□ -0.49
TPM3-202ENST00000302206 DNAJC8O75937 253 aaPredicted RBP11.98□□□□□ -0.49
TPM3-202ENST00000302206 UBOX5O94941 541 aa11.98□□□□□ -0.49
TPM3-202ENST00000302206 POP4O95707 220 aaKnown RBP11.98□□□□□ -0.49
TPM3-202ENST00000302206 ASLP04424 464 aa11.98□□□□□ -0.49
TPM3-202ENST00000302206 SBK3P0C264 359 aa11.98□□□□□ -0.49
TPM3-202ENST00000302206 SERPINB5P36952 375 aa11.98□□□□□ -0.49
TPM3-202ENST00000302206 SCTRP47872 440 aa11.98□□□□□ -0.49
TPM3-202ENST00000302206 ADARP55265 1226 aaKnown RBP11.98□□□□□ -0.49
TPM3-202ENST00000302206 DNAJB13P59910 316 aa11.98□□□□□ -0.49
TPM3-202ENST00000302206 RAD51Q06609 339 aa11.98□□□□□ -0.49
TPM3-202ENST00000302206 SF3A3Q12874 501 aaKnown RBP eCLIP11.98□□□□□ -0.49
TPM3-202ENST00000302206 DLG1Q12959 904 aa11.98□□□□□ -0.49
TPM3-202ENST00000302206 SEMA3AQ14563 771 aa11.98□□□□□ -0.49
TPM3-202ENST00000302206 PTPRCAPQ14761 206 aa11.98□□□□□ -0.49
TPM3-202ENST00000302206 ACAP2Q15057 778 aa11.98□□□□□ -0.49
TPM3-202ENST00000302206 CARD16Q5EG05 197 aa11.98□□□□□ -0.49
TPM3-202ENST00000302206 LIPMQ5VYY2 423 aa11.98□□□□□ -0.49
TPM3-202ENST00000302206 FAM91A1Q658Y4 838 aa11.98□□□□□ -0.49
TPM3-202ENST00000302206 KLC3Q6P597 504 aa11.98□□□□□ -0.49
TPM3-202ENST00000302206 ADIPOR2Q86V24 386 aa11.98□□□□□ -0.49
TPM3-202ENST00000302206 CAMK1DQ8IU85 385 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms