RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 A8MT66 165 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 E9PAM4 449 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 OR4F21O95013 312 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 DHRS4L1P0CG22 281 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 MZF1P28698 734 aaPredicted RBP13.3□□□□□ -0.28
CASC4-201ENST00000299957 SLC11A2P49281 568 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 INPP1P49441 399 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 GPR15P49685 360 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 DGKQP52824 942 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 IL2P60568 153 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 LIPEQ05469 1076 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 BNIP3Q12983 259 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 NR1D2Q14995 579 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 FAM151BQ6UXP7 276 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 NECAB2Q7Z6G3 386 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 TMEM40Q8WWA1 233 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 OSBPL11Q9BXB4 747 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 WDR70Q9NW82 654 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 PCNTO95613 3336 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 TOMM70O94826 608 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 CLCN5P51795 746 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 DIO3P55073 304 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 MTTPP55157 894 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 ZNF280AP59817 542 aaPredicted RBP13.3□□□□□ -0.28
CASC4-201ENST00000299957 TAF10Q12962 218 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 DUSP4Q13115 394 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 LAPTM5Q13571 262 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 RNF219Q5W0B1 726 aaPredicted RBP13.3□□□□□ -0.28
CASC4-201ENST00000299957 BBS2Q9BXC9 721 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 UNC93B1Q9H1C4 597 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 IGSF9Q9P2J2 1179 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 EIF2B4Q9UI10 523 aaKnown RBP13.3□□□□□ -0.28
CASC4-201ENST00000299957 NBNO60934 754 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 PRSS56P0CW18 603 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 MBL2P11226 248 aaPredicted RBP13.3□□□□□ -0.28
CASC4-201ENST00000299957 GNA12Q03113 381 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 LRRC73Q5JTD7 316 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 IQSEC1Q6DN90 963 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 ADCK2Q7Z695 626 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 ZNF598Q86UK7 904 aaKnown RBP13.3□□□□□ -0.28
CASC4-201ENST00000299957 OR2T34Q8NGX1 318 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 OR2T3Q8NH03 318 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 CASP10Q92851 521 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 AKTIPQ9H8T0 292 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 CRTAC1Q9NQ79 661 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 SELENONQ9NZV5 590 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 GALPQ9UBC7 116 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 CDH9Q9ULB4 789 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 EMCNQ9ULC0 261 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 CEP290O15078 2479 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 NUP214P35658 2090 aaPredicted RBP13.29□□□□□ -0.28
CASC4-201ENST00000299957 PPP6CO00743 305 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 GOT2P00505 430 aaKnown RBP13.29□□□□□ -0.28
CASC4-201ENST00000299957 PFKMP08237 780 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 MSLNQ13421 630 aaPredicted RBP13.29□□□□□ -0.28
CASC4-201ENST00000299957 CACHD1Q5VU97 1274 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 GLYATQ6IB77 296 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 PAQR3Q6TCH7 311 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 CCDC103Q8IW40 242 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 CPNE9Q8IYJ1 553 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 OR56A4Q8NGH8 313 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 OR4L1Q8NH43 312 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 ZYG11BQ9C0D3 744 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 NOL6Q9H6R4 1146 aaKnown RBP13.29□□□□□ -0.28
CASC4-201ENST00000299957 DMTF1Q9Y222 760 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 ATP11BQ9Y2G3 1177 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 ARL5CA6NH57 179 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 CNTN5O94779 1100 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 STAU1O95793 577 aaKnown RBP13.29□□□□□ -0.28
CASC4-201ENST00000299957 CST1P01037 141 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 ATP5BP06576 529 aaKnown RBP13.29□□□□□ -0.28
CASC4-201ENST00000299957 RPL17P18621 184 aaKnown RBP13.29□□□□□ -0.28
CASC4-201ENST00000299957 ADRM1Q16186 407 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 STXBP5Q5T5C0 1151 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 OR52E8Q6IFG1 317 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 LZTR1Q8N653 840 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 MED8Q96G25 268 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 MLPHQ9BV36 600 aaPredicted RBP13.29□□□□□ -0.28
CASC4-201ENST00000299957 GNG14A0A1W2PPG7 69 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 SPATA31D3P0C874 917 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 STT3AP46977 705 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 PIGFQ07326 219 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 PRKG2Q13237 762 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 MAPKAPK3Q16644 382 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 DCLRE1AQ6PJP8 1040 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 SPATA31D4Q6ZUB0 917 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 ADI1Q9BV57 179 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 PCDH12Q9NPG4 1184 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 ABCB10Q9NRK6 738 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 SCN3BQ9NY72 215 aa13.29□□□□□ -0.28
CASC4-201ENST00000299957 UBA2Q9UBT2 640 aaPredicted RBP13.29□□□□□ -0.28
CASC4-201ENST00000299957 A0A1W2PPW3 197 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 PRR23AA6NEV1 266 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 INCA1Q0VD86 236 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 ITGA7Q13683 1181 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 MYLK3Q32MK0 819 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 ABRAXAS1Q6UWZ7 409 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 C14orf80Q86SX3 495 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 RASAL3Q86YV0 1011 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 ZFP28Q8NHY6 868 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms