RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 IGBP1P78318 339 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 FAM83EQ2M2I3 478 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 KIF19Q2TAC6 998 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 Q3C1V9 767 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 SLC25A52Q3SY17 297 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 ARHGAP17Q68EM7 881 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 ATP6V0D2Q8N8Y2 350 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 PIK3C3Q8NEB9 887 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 HDAC2Q92769 488 aaKnown RBP13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 TMEM125Q96AQ2 219 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 FAM167AQ96KS9 214 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 GMLQ99445 158 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 WARS2Q9UGM6 360 aaKnown RBP13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 PCDHGA11Q9Y5H2 935 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 ANKRD34BA5PLL1 514 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 CHRM3P20309 590 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 TCEA1P23193 301 aaKnown RBP13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 DNAJB2P25686 324 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 GSK3BP49841 420 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 ARSFP54793 590 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 GABARAPL2P60520 117 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 COQ5Q5HYK3 327 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 BTBD8Q5XKL5 378 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 THAP5Q7Z6K1 395 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 ELMO2Q96JJ3 720 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 TRIM54Q9BYV2 358 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 ALG2Q9H553 416 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 ACAD9Q9H845 621 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 HPS4Q9NQG7 708 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 FBXO8Q9NRD0 319 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 NRCAMQ92823 1304 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 AP3B1O00203 1094 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 EEF2KO00418 725 aaKnown RBP13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 GMNNO75496 209 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 DNAJB5O75953 348 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 NR4A1P22736 598 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 ARNTP27540 789 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 SLC1A2P43004 574 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 ALDH3A2P51648 485 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 CSHL1Q14406 222 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 DPY19L1Q2PZI1 675 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 TIGD2Q4W5G0 525 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 NAPEPLDQ6IQ20 393 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 BNIPLQ7Z465 357 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 SLCO6A1Q86UG4 719 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 SLC43A3Q8NBI5 491 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 SMG8Q8ND04 991 aaKnown RBP13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 DNERQ8NFT8 737 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 BPIFB1Q8TDL5 484 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 RPL10LQ96L21 214 aaKnown RBP13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 TRMOQ9BU70 441 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 AKTIPQ9H8T0 292 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 CDHR5Q9HBB8 845 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 DPP3Q9NY33 737 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 FBXO9Q9UK97 447 aaPredicted RBP13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 TRHDEQ9UKU6 1024 aa13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 ZFC3H1O60293 1989 aaKnown RBP13.5□□□□□ -0.25
RPUSD4-201ENST00000298317 C16orf96A6NNT2 1141 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 BMP4P12644 408 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 IL7RP16871 459 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 PLK1P53350 603 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 TNFAIP2Q03169 654 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 BST2Q10589 180 aaKnown RBP13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 TMEM132BQ14DG7 1078 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 POLD3Q15054 466 aaPredicted RBP13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 ZIK1Q3SY52 487 aaPredicted RBP13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 PPP2R2DQ66LE6 453 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 PKN3Q6P5Z2 889 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 KIAA0408Q6ZU52 694 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 LRRC49Q8IUZ0 686 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 DEFB106AQ8N104 65 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 MIER2Q8N344 545 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 BDH2Q9BUT1 245 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 ADNPQ9H2P0 1102 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 SLC52A3Q9NQ40 469 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 KLQ9UEF7 1012 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 ADAMTS5Q9UNA0 930 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 XYLBO75191 536 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 GABARAPO95166 117 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 MATN4O95460 622 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 MT-ND1P03886 318 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 ALPLP05186 524 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 NCK1P16333 377 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 ERCC2P18074 760 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 ITIH1P19827 911 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 MZF1P28698 734 aaPredicted RBP13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 PITX1P78337 314 aaPredicted RBP13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 IFITM2Q01629 132 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 POU4F1Q01851 419 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 DAG1Q14118 895 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 CRY1Q16526 586 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 PHYKPLQ8IUZ5 450 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 SCML4Q8N228 414 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 HDAC11Q96DB2 347 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 BCL7BQ9BQE9 202 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 LPIN3Q9BQK8 851 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 DGCR6LQ9BY27 220 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 TRIM8Q9BZR9 551 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 NTN4Q9HB63 628 aa13.49□□□□□ -0.25
RPUSD4-201ENST00000298317 SPON1Q9HCB6 807 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms