RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 SLC1A2P43004 574 aa24.6■■□□□ 1.53
GTF2A1-201ENST00000298173 ZNF470Q6ECI4 717 aa24.6■■□□□ 1.53
GTF2A1-201ENST00000298173 MTBPQ96DY7 904 aa24.6■■□□□ 1.53
GTF2A1-201ENST00000298173 MARCH4Q9P2E8 410 aaPredicted RBP24.6■■□□□ 1.53
GTF2A1-201ENST00000298173 TXNDC16Q9P2K2 825 aa24.6■■□□□ 1.53
GTF2A1-201ENST00000298173 C1QTNF3-AMACRE9PGA6 284 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 MAN2B1O00754 1011 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 CD3EAPO15446 510 aaKnown RBP24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 F7P08709 466 aaPredicted RBP24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 C7P10643 843 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 ZNF30P17039 623 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 VIPR1P32241 457 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 LEPRP48357 1165 aaKnown RBP24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 SATB1Q01826 763 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 MLF2Q15773 248 aaPredicted RBP24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 SDE2Q6IQ49 451 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 TIFABQ6ZNK6 161 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 SH2D5Q6ZV89 423 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 DPPA4Q7L190 304 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 TRMT11Q7Z4G4 463 aaKnown RBP24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 GABPB2Q8TAK5 448 aaPredicted RBP24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 PPP1R16AQ96I34 528 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 A0A1W2PQF6 199 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 TRIM49D1C9J1S8 452 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 SPINT1O43278 529 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 SYNCRIPO60506 623 aaKnown RBP24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 ITGA2BP08514 1039 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 CREB1P16220 341 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 BPIP17213 487 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 CD72P21854 359 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 FOXN2P32314 431 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 SPRP35270 261 aaPredicted RBP24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 SUOXP51687 545 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 COPAP53621 1224 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 LIMK2P53671 638 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 PTPN5P54829 565 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 MPP1Q00013 466 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 RALGDSQ12967 914 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 DNAJC3Q13217 504 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 FAM46CQ5VWP2 391 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 KIAA1211LQ6NV74 962 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 AFTPHQ6ULP2 937 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 ZC3HC1Q86WB0 502 aaKnown RBP24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 ZNF687Q8N1G0 1237 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 TXNDC5Q8NBS9 432 aaKnown RBP24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 HDAC8Q9BY41 377 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 SENP1Q9P0U3 644 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 SORCS3Q9UPU3 1222 aa24.59■■□□□ 1.53
GTF2A1-201ENST00000298173 GAPDHSO14556 408 aaPredicted RBP24.58■■□□□ 1.53
GTF2A1-201ENST00000298173 AREL1O15033 823 aa24.58■■□□□ 1.53
GTF2A1-201ENST00000298173 KLF8O95600 359 aaPredicted RBP24.58■■□□□ 1.53
GTF2A1-201ENST00000298173 S1PR4O95977 384 aa24.58■■□□□ 1.53
GTF2A1-201ENST00000298173 C1SP09871 688 aa24.58■■□□□ 1.53
GTF2A1-201ENST00000298173 MMP12P39900 470 aa24.58■■□□□ 1.53
GTF2A1-201ENST00000298173 STC1P52823 247 aa24.58■■□□□ 1.53
GTF2A1-201ENST00000298173 SEMA3AQ14563 771 aa24.58■■□□□ 1.53
GTF2A1-201ENST00000298173 MROH9Q5TGP6 573 aa24.58■■□□□ 1.53
GTF2A1-201ENST00000298173 OR2T3Q8NH03 318 aa24.58■■□□□ 1.53
GTF2A1-201ENST00000298173 SCG3Q8WXD2 468 aaKnown RBP24.58■■□□□ 1.53
GTF2A1-201ENST00000298173 RHOJQ9H4E5 214 aa24.58■■□□□ 1.53
GTF2A1-201ENST00000298173 IL26Q9NPH9 171 aa24.58■■□□□ 1.53
GTF2A1-201ENST00000298173 CATSPERZQ9NTU4 200 aa24.58■■□□□ 1.53
GTF2A1-201ENST00000298173 HAUS5O94927 633 aa24.57■■□□□ 1.52
GTF2A1-201ENST00000298173 ADRB3P13945 408 aa24.57■■□□□ 1.52
GTF2A1-201ENST00000298173 OGNP20774 298 aaKnown RBP24.57■■□□□ 1.52
GTF2A1-201ENST00000298173 XPAP23025 273 aaPredicted RBP24.57■■□□□ 1.52
GTF2A1-201ENST00000298173 MC4RP32245 332 aa24.57■■□□□ 1.52
GTF2A1-201ENST00000298173 BMPR2Q13873 1038 aa24.57■■□□□ 1.52
GTF2A1-201ENST00000298173 HSF5Q4G112 596 aaPredicted RBP24.57■■□□□ 1.52
GTF2A1-201ENST00000298173 MRNIPQ6NTE8 343 aa24.57■■□□□ 1.52
GTF2A1-201ENST00000298173 FBXL19Q6PCT2 694 aa24.57■■□□□ 1.52
GTF2A1-201ENST00000298173 ERN2Q76MJ5 926 aaKnown RBP24.57■■□□□ 1.52
GTF2A1-201ENST00000298173 SRRM1Q8IYB3 904 aaKnown RBP24.57■■□□□ 1.52
GTF2A1-201ENST00000298173 PNPLA1Q8N8W4 532 aa24.57■■□□□ 1.52
GTF2A1-201ENST00000298173 ERLEC1Q96DZ1 483 aa24.57■■□□□ 1.52
GTF2A1-201ENST00000298173 SERAC1Q96JX3 654 aa24.57■■□□□ 1.52
GTF2A1-201ENST00000298173 RFPL1O75677 317 aa24.56■■□□□ 1.52
GTF2A1-201ENST00000298173 PSMD8P48556 350 aa24.56■■□□□ 1.52
GTF2A1-201ENST00000298173 SPINT3P49223 89 aa24.56■■□□□ 1.52
GTF2A1-201ENST00000298173 PRKCQQ04759 706 aa24.56■■□□□ 1.52
GTF2A1-201ENST00000298173 ARHGEF7Q14155 803 aa24.56■■□□□ 1.52
GTF2A1-201ENST00000298173 CST6Q15828 149 aa24.56■■□□□ 1.52
GTF2A1-201ENST00000298173 TYSND1Q2T9J0 566 aa24.56■■□□□ 1.52
GTF2A1-201ENST00000298173 FASTKD1Q53R41 847 aaKnown RBP24.56■■□□□ 1.52
GTF2A1-201ENST00000298173 ZNF789Q5FWF6 425 aa24.56■■□□□ 1.52
GTF2A1-201ENST00000298173 ERAP2Q6P179 960 aa24.56■■□□□ 1.52
GTF2A1-201ENST00000298173 TAOK1Q7L7X3 1001 aa24.56■■□□□ 1.52
GTF2A1-201ENST00000298173 LDB1Q86U70 411 aaPredicted RBP24.56■■□□□ 1.52
GTF2A1-201ENST00000298173 GPR26Q8NDV2 337 aa24.56■■□□□ 1.52
GTF2A1-201ENST00000298173 PBXIP1Q96AQ6 731 aa24.56■■□□□ 1.52
GTF2A1-201ENST00000298173 VPS39Q96JC1 886 aa24.56■■□□□ 1.52
GTF2A1-201ENST00000298173 FBRSQ9HAH7 460 aa24.56■■□□□ 1.52
GTF2A1-201ENST00000298173 THEGQ9P2T0 379 aa24.56■■□□□ 1.52
GTF2A1-201ENST00000298173 WNT16Q9UBV4 365 aa24.56■■□□□ 1.52
GTF2A1-201ENST00000298173 RNASEH1O60930 286 aaKnown RBP24.56■■□□□ 1.52
GTF2A1-201ENST00000298173 MT-ND3P03897 115 aa24.56■■□□□ 1.52
GTF2A1-201ENST00000298173 PRSS56P0CW18 603 aa24.56■■□□□ 1.52
GTF2A1-201ENST00000298173 COL9A1P20849 921 aa24.56■■□□□ 1.52
GTF2A1-201ENST00000298173 DRD3P35462 400 aa24.56■■□□□ 1.52
GTF2A1-201ENST00000298173 NEK3P51956 506 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms