RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 SEMA3CQ99985 751 aa24.39■■□□□ 1.49
SPTSSA-201ENST00000298130 DUS2Q9NX74 493 aaKnown RBP24.39■■□□□ 1.49
SPTSSA-201ENST00000298130 TSR3Q9UJK0 312 aaKnown RBP24.39■■□□□ 1.49
SPTSSA-201ENST00000298130 UBA6A0AVT1 1052 aaPredicted RBP24.38■■□□□ 1.49
SPTSSA-201ENST00000298130 LDB2O43679 373 aa24.38■■□□□ 1.49
SPTSSA-201ENST00000298130 PYGLP06737 847 aa24.38■■□□□ 1.49
SPTSSA-201ENST00000298130 NCK1P16333 377 aa24.38■■□□□ 1.49
SPTSSA-201ENST00000298130 DNAJB1P25685 340 aa24.38■■□□□ 1.49
SPTSSA-201ENST00000298130 MS4A13Q5J8X5 152 aa24.38■■□□□ 1.49
SPTSSA-201ENST00000298130 RNF217Q8TC41 542 aa24.38■■□□□ 1.49
SPTSSA-201ENST00000298130 ADAM2Q99965 735 aa24.38■■□□□ 1.49
SPTSSA-201ENST00000298130 KATNAL1Q9BW62 490 aa24.38■■□□□ 1.49
SPTSSA-201ENST00000298130 PREBQ9HCU5 417 aa24.38■■□□□ 1.49
SPTSSA-201ENST00000298130 IKZF3Q9UKT9 509 aa24.38■■□□□ 1.49
SPTSSA-201ENST00000298130 USP22Q9UPT9 525 aa24.38■■□□□ 1.49
SPTSSA-201ENST00000298130 A0A0U1RQS6 177 aa24.38■■□□□ 1.49
SPTSSA-201ENST00000298130 GFAPP14136 432 aa24.38■■□□□ 1.49
SPTSSA-201ENST00000298130 CD1DP15813 335 aa24.38■■□□□ 1.49
SPTSSA-201ENST00000298130 TBCELQ5QJ74 424 aa24.38■■□□□ 1.49
SPTSSA-201ENST00000298130 CARM1Q86X55 608 aa24.38■■□□□ 1.49
SPTSSA-201ENST00000298130 SLC22A9Q8IVM8 553 aa24.38■■□□□ 1.49
SPTSSA-201ENST00000298130 KLHDC9Q8NEP7 349 aa24.38■■□□□ 1.49
SPTSSA-201ENST00000298130 DNAJB14Q8TBM8 379 aa24.38■■□□□ 1.49
SPTSSA-201ENST00000298130 PBXIP1Q96AQ6 731 aa24.38■■□□□ 1.49
SPTSSA-201ENST00000298130 CYP2S1Q96SQ9 504 aa24.38■■□□□ 1.49
SPTSSA-201ENST00000298130 SOX17Q9H6I2 414 aaPredicted RBP24.38■■□□□ 1.49
SPTSSA-201ENST00000298130 VPS45Q9NRW7 570 aa24.38■■□□□ 1.49
SPTSSA-201ENST00000298130 SARDHQ9UL12 918 aa24.38■■□□□ 1.49
SPTSSA-201ENST00000298130 CCDC162PA2VCL2 907 aa24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 PRDX3P30048 256 aaKnown RBP24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 HERVK_113P63132 956 aa24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 ERVK-6Q9BXR3 956 aa24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 GMIPQ9P107 970 aa24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 HTTP42858 3142 aa24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 H6PDO95479 791 aa24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 SLC2A3P11169 496 aa24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 HGFP14210 728 aa24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 YWHAHQ04917 246 aaPredicted RBP24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 PLA2G4EQ3MJ16 856 aa24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 HABP4Q5JVS0 413 aaKnown RBP24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 THEM5Q8N1Q8 247 aa24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 TEX37Q96LM6 180 aa24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 ATXN10Q9UBB4 475 aa24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 ATXN1LP0C7T5 689 aaKnown RBP24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 PSMD8P48556 350 aa24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 ARPP19P56211 112 aa24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 TBX4P57082 545 aa24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 PABPC1LQ4VXU2 614 aaKnown RBP24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 RABL3Q5HYI8 236 aa24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 CLYBLQ8N0X4 340 aa24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 CFAP52Q8N1V2 620 aa24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 OR2T34Q8NGX1 318 aa24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 OR2T3Q8NH03 318 aa24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 ARRDC2Q8TBH0 407 aa24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 NUDT8Q8WV74 236 aa24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 OSBPL11Q9BXB4 747 aa24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 ATP13A1Q9HD20 1204 aa24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 SLC45A1Q9Y2W3 748 aa24.37■■□□□ 1.49
SPTSSA-201ENST00000298130 FBXL22Q6P050 247 aa24.36■■□□□ 1.49
SPTSSA-201ENST00000298130 ZNF280BQ86YH2 543 aa24.36■■□□□ 1.49
SPTSSA-201ENST00000298130 CCDC117Q8IWD4 279 aaPredicted RBP24.36■■□□□ 1.49
SPTSSA-201ENST00000298130 SLC15A3Q8IY34 581 aa24.36■■□□□ 1.49
SPTSSA-201ENST00000298130 EXOC2Q96KP1 924 aa24.36■■□□□ 1.49
SPTSSA-201ENST00000298130 ARNT2Q9HBZ2 717 aa24.36■■□□□ 1.49
SPTSSA-201ENST00000298130 SLAMF8Q9P0V8 285 aa24.36■■□□□ 1.49
SPTSSA-201ENST00000298130 PRG3Q9Y2Y8 225 aaPredicted RBP24.36■■□□□ 1.49
SPTSSA-201ENST00000298130 MTHFD2P13995 350 aa24.36■■□□□ 1.49
SPTSSA-201ENST00000298130 RPS6KA2Q15349 733 aa24.36■■□□□ 1.49
SPTSSA-201ENST00000298130 SPRYD7Q5W111 196 aa24.36■■□□□ 1.49
SPTSSA-201ENST00000298130 ZNF786Q8N393 782 aa24.36■■□□□ 1.49
SPTSSA-201ENST00000298130 RMND5BQ96G75 393 aaPredicted RBP24.36■■□□□ 1.49
SPTSSA-201ENST00000298130 UPF3AQ9H1J1 476 aaKnown RBP24.36■■□□□ 1.49
SPTSSA-201ENST00000298130 MFSD1Q9H3U5 465 aa24.36■■□□□ 1.49
SPTSSA-201ENST00000298130 CMTM6Q9NX76 183 aa24.36■■□□□ 1.49
SPTSSA-201ENST00000298130 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.36■■□□□ 1.49
SPTSSA-201ENST00000298130 MROH6A6NGR9 719 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 TMX2-CTNND1H3BSU7 103 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 ANGPT2O15123 496 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 CD3EAPO15446 510 aaKnown RBP24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 FOXD2O60548 495 aaPredicted RBP24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 TRMUO75648 421 aaKnown RBP24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 CDK4P11802 303 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 TXNL4AP83876 142 aaKnown RBP24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 PTPRRQ15256 657 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 EPHX4Q8IUS5 362 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 CPNE9Q8IYJ1 553 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 ATAD1Q8NBU5 361 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 ZYG11BQ9C0D3 744 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 PLK2Q9NYY3 685 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 MYRFQ9Y2G1 1151 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 LAMA3Q16787 3333 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 MIA3Q5JRA6 1907 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 H3BNH8 94 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 ENPP3O14638 875 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 AZIN1O14977 448 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 SLC7A4O43246 635 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 BAIAP3O94812 1187 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 GLP2RO95838 553 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 FMO4P31512 558 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 TRAP1Q12931 704 aaKnown RBP24.35■■□□□ 1.49
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