RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 GID8Q9NWU2 228 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 CEPT1Q9Y6K0 416 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 NRCAMQ92823 1304 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 AZIN1O14977 448 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 TOMM70O94826 608 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 LDLRP01130 860 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 AGTR2P50052 363 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 CDKN2DP55273 166 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 NUP107P57740 925 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 TSPY1Q01534 308 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 NR6A1Q15406 480 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 TSNQ15631 228 aaKnown RBP13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 GNASQ5JWF2 1037 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 C10orf120Q5SQS8 335 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 MARCH8Q5T0T0 291 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 TMEM102Q8N9M5 508 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 CASP10Q92851 521 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 SMARCD1Q96GM5 515 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 TRNAU1APQ9NX07 287 aaKnown RBP13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 PRSS51A0A1B0GVH4 220 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 CCDC154A6NI56 674 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 ZSCAN9O15535 394 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 CNMDO75829 334 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 CNTN5O94779 1100 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 HSPA1AP0DMV8 641 aaKnown RBP13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 HSPA1BP0DMV9 641 aaKnown RBP13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 SLC2A3P11169 496 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 PCSK1P29120 753 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 MFSD10Q14728 455 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 SLC39A12Q504Y0 691 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 TIGD5Q53EQ6 642 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 CXCL17Q6UXB2 119 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 TLK2Q86UE8 772 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 GFM2Q969S9 779 aaKnown RBP13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 SEPT5Q99719 369 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 FANCEQ9HB96 536 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 NME4O00746 187 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 IL7RP16871 459 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 SLC7A1P30825 629 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 GRK4P32298 578 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 PGFP49763 221 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 DGKQP52824 942 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 LIPEQ05469 1076 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 MERTKQ12866 999 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 ATP6AP1LQ52LC2 224 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 TAPT1Q6NXT6 567 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 GALNT18Q6P9A2 607 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 SPESP1Q6UW49 350 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 CALML6Q8TD86 181 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 LZICQ8WZA0 190 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 ELMO1Q92556 727 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 PPP1R10Q96QC0 940 aaKnown RBP13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 ENTPD7Q9NQZ7 604 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 TBC1D13Q9NVG8 400 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 MIOSQ9NXC5 875 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 RCOR3Q9P2K3 495 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 AASSQ9UDR5 926 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 LIMD1Q9UGP4 676 aa13.3□□□□□ -0.28
TNFRSF21-201ENST00000296861 ACOT8O14734 319 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 ZNF189O75820 626 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 RSL1D1O76021 490 aaKnown RBP13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 IMPDH2P12268 514 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 PRKACGP22612 351 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 PRDX3P30048 256 aaKnown RBP13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 GPR15P49685 360 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 SH3BP2P78314 561 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 POU4F1Q01851 419 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 SEMG2Q02383 582 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 TWF1Q12792 350 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 OVOS1Q6IE37 1185 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 C3orf58Q8NDZ4 430 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 ZMIZ2Q8NF64 920 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 HMCESQ96FZ2 354 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 MAML3Q96JK9 1138 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 ZNF696Q9H7X3 374 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 AGO3Q9H9G7 860 aaKnown RBP13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 PLGRKTQ9HBL7 147 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 CNGB3Q9NQW8 809 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.29□□□□□ -0.289e-7■■■■□ 19.3
TNFRSF21-201ENST00000296861 SLC27A5Q9Y2P5 690 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 IQCF5A8MTL0 148 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 PIRO00625 290 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 GPR39O43194 453 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 IRF1P10914 325 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 HAPLN1P10915 354 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 CAPN3P20807 821 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 UGT1A1P22309 533 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 UGT1A4P22310 534 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 UGT1A3P35503 534 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 UGT1A5P35504 534 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 CREB5Q02930 508 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 NR1D2Q14995 579 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 POLD3Q15054 466 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 PTPRRQ15256 657 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 FAM126BQ8IXS8 530 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 ISOC1Q96CN7 298 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 NSMCE2Q96MF7 247 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 SYT17Q9BSW7 474 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 ST3GAL5Q9UNP4 418 aa13.29□□□□□ -0.28
TNFRSF21-201ENST00000296861 SH3GLB1Q9Y371 365 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms