RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 SP140LQ9H930 580 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 LRRC42Q9Y546 428 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 PPP2R3BQ9Y5P8 575 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 GSAPA4D1B5 854 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 PRG2P13727 222 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 MAPK8P45983 427 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 PCBP1Q15365 356 aaKnown RBP eCLIP11.03□□□□□ -0.64
PBRM1-201ENST00000296302 TEX44Q53QW1 395 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 USP45Q70EL2 814 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 RNF180Q86T96 592 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 UNC5BQ8IZJ1 945 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 ZFP28Q8NHY6 868 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 ZNF570Q96NI8 536 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 MRIQ9BWK5 157 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 PIGUQ9H490 435 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 ALG2Q9H553 416 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 NOCTQ9UK39 431 aaKnown RBP11.03□□□□□ -0.64
PBRM1-201ENST00000296302 ZNF232Q9UNY5 417 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 CYP7B1O75881 506 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 POMCP01189 267 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 CTSKP43235 329 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 PPM1JQ5JR12 505 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 WSCD1Q658N2 575 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 FAM92BQ6ZTR7 304 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 UTS2BQ765I0 119 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 C16orf62Q7Z3J2 963 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 LRRC52Q8N7C0 313 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 ZNF781Q8N8C0 355 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 PIK3R3Q92569 461 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 CITED4Q96RK1 184 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 GLOD4Q9HC38 313 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 WDR37Q9Y2I8 494 aa11.03□□□□□ -0.64
PBRM1-201ENST00000296302 FAM149AA5PLN7 773 aa11.02□□□□□ -0.64
PBRM1-201ENST00000296302 ANKDD1BA6NHY2 528 aa11.02□□□□□ -0.64
PBRM1-201ENST00000296302 SCELO95171 688 aa11.02□□□□□ -0.64
PBRM1-201ENST00000296302 ECDO95905 644 aaPredicted RBP11.02□□□□□ -0.64
PBRM1-201ENST00000296302 ITGB5P18084 799 aa11.02□□□□□ -0.64
PBRM1-201ENST00000296302 LPOP22079 712 aaPredicted RBP11.02□□□□□ -0.64
PBRM1-201ENST00000296302 CDK18Q07002 472 aa11.02□□□□□ -0.64
PBRM1-201ENST00000296302 EML3Q32P44 896 aa11.02□□□□□ -0.64
PBRM1-201ENST00000296302 VPS26BQ4G0F5 336 aa11.02□□□□□ -0.64
PBRM1-201ENST00000296302 MFSD4BQ5TF39 518 aa11.02□□□□□ -0.64
PBRM1-201ENST00000296302 BHLHB9Q6PI77 547 aa11.02□□□□□ -0.64
PBRM1-201ENST00000296302 LCLAT1Q6UWP7 414 aa11.02□□□□□ -0.64
PBRM1-201ENST00000296302 TWIST2Q8WVJ9 160 aa11.02□□□□□ -0.64
PBRM1-201ENST00000296302 AKAP7Q9P0M2 348 aaPredicted RBP11.02□□□□□ -0.64
PBRM1-201ENST00000296302 U3KQV3 271 aa11.02□□□□□ -0.64
PBRM1-201ENST00000296302 ELOVL7A1L3X0 281 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 PGRMC2O15173 223 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 NPHS1O60500 1241 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 SH3BGRLO75368 114 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 CXCR2P25025 360 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 PSMA1P25786 263 aaKnown RBP11.02□□□□□ -0.65
PBRM1-201ENST00000296302 SDC2P34741 201 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 FSTL1Q12841 308 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 SIM2Q14190 667 aaPredicted RBP11.02□□□□□ -0.65
PBRM1-201ENST00000296302 HERC3Q15034 1050 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 PRKD1Q15139 912 aaPredicted RBP11.02□□□□□ -0.65
PBRM1-201ENST00000296302 HECTD2Q5U5R9 776 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 CYP20A1Q6UW02 462 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 ITIH5Q86UX2 942 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 NXNL1Q96CM4 212 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 LINGO1Q96FE5 620 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 PPM1MQ96MI6 270 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 CPXM1Q96SM3 734 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 YTHDF1Q9BYJ9 559 aaKnown RBP11.02□□□□□ -0.65
PBRM1-201ENST00000296302 NXF3Q9H4D5 531 aaKnown RBP11.02□□□□□ -0.65
PBRM1-201ENST00000296302 KAT8Q9H7Z6 458 aaKnown RBP11.02□□□□□ -0.65
PBRM1-201ENST00000296302 PCDH12Q9NPG4 1184 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 TMEM138Q9NPI0 162 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 AAASQ9NRG9 546 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 TMEM59LQ9UK28 342 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.02□□□□□ -0.65
PBRM1-201ENST00000296302 PTCH2Q9Y6C5 1203 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 MDM4O15151 490 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 NDUFS2O75306 463 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 SERPINB7O75635 380 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 ALDH2P05091 517 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 CES1P23141 567 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 STARP49675 285 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 GTF2A2P52657 109 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 GMFBP60983 142 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 HSPA14Q0VDF9 509 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 CCNIQ14094 377 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 GALNT3Q14435 633 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 FAM180AQ6UWF9 173 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 FAM20CQ8IXL6 584 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 SLC34A3Q8N130 599 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 TRPV1Q8NER1 839 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 C17orf50Q8WW18 174 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 RAD18Q9NS91 495 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 PDP1Q9P0J1 537 aaPredicted RBP11.02□□□□□ -0.65
PBRM1-201ENST00000296302 PRMT5O14744 637 aaPredicted RBP11.02□□□□□ -0.65
PBRM1-201ENST00000296302 CASKO14936 926 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 AIREO43918 545 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 AP2A1O95782 977 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 PCSK2P16519 638 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 MAGP20916 626 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 SLC6A2P23975 617 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 SLC7A1P30825 629 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms