RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 BTRCQ9Y297 605 aa11.77□□□□□ -0.53
RHO-201ENST00000296271 ASB1Q9Y576 335 aa11.77□□□□□ -0.53
RHO-201ENST00000296271 PCDHGB5Q9Y5G0 923 aa11.77□□□□□ -0.53
RHO-201ENST00000296271 DNAJA2O60884 412 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 ALDOCP09972 364 aaKnown RBP11.76□□□□□ -0.53
RHO-201ENST00000296271 ZNF37AP17032 561 aaPredicted RBP11.76□□□□□ -0.53
RHO-201ENST00000296271 MAPKAPK2P49137 400 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 ALDH7A1P49419 539 aaKnown RBP11.76□□□□□ -0.53
RHO-201ENST00000296271 AGTR2P50052 363 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 OXCT1P55809 520 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 ARF5P84085 180 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 AGKQ53H12 422 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 KLC3Q6P597 504 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 PAOXQ6QHF9 649 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 GLT6D1Q7Z4J2 308 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 KBTBD6Q86V97 674 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 RP9Q8TA86 221 aaKnown RBP11.76□□□□□ -0.53
RHO-201ENST00000296271 FAM110BQ8TC76 370 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 TRPC4APQ8TEL6 797 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 ZNF296Q8WUU4 475 aaPredicted RBP11.76□□□□□ -0.53
RHO-201ENST00000296271 MGME1Q9BQP7 344 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 TSEN34Q9BSV6 310 aaKnown RBP11.76□□□□□ -0.53
RHO-201ENST00000296271 ELAC1Q9H777 363 aaKnown RBP11.76□□□□□ -0.53
RHO-201ENST00000296271 VTI1BQ9UEU0 232 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 FKBPLQ9UIM3 349 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 FCF1Q9Y324 198 aaKnown RBP11.76□□□□□ -0.53
RHO-201ENST00000296271 TRAF6Q9Y4K3 522 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 A6NHS1 94 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 A8MX80 341 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 RNASEH1O60930 286 aaKnown RBP11.76□□□□□ -0.53
RHO-201ENST00000296271 NIPSNAP2O75323 286 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 CDK14O94921 469 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 NDST3O95803 873 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 FGF1P05230 155 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 RHOCP08134 193 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 CTPS1P17812 591 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 PRDX6P30041 224 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 POLD2P49005 469 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 ACVR1Q04771 509 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 KLC1Q07866 573 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 TRAF2Q12933 501 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 TSNQ15631 228 aaKnown RBP11.76□□□□□ -0.53
RHO-201ENST00000296271 TRIP10Q15642 601 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 PIGGQ5H8A4 983 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 HECTD3Q5T447 861 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 RNF220Q5VTB9 566 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 CXorf57Q6NSI4 855 aaKnown RBP11.76□□□□□ -0.53
RHO-201ENST00000296271 KIAA1841Q6NSI8 718 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 CEP70Q8NHQ1 597 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 VWCEQ96DN2 955 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 KLHL32Q96NJ5 620 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 PPP1R2P1Q96PQ5 205 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 PSKH2Q96QS6 385 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 TTLL2Q9BWV7 592 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 MUC3BQ9H195 1237 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 LRCH1Q9Y2L9 728 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 TIMM22Q9Y584 194 aa11.76□□□□□ -0.53
RHO-201ENST00000296271 E7ENX8 843 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 F11P03951 625 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 ALPIP09923 528 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 HLA-DPA1P20036 260 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 IMPDH1P20839 514 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 HOXD10P28358 340 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 ZNF140P52738 457 aaPredicted RBP11.75□□□□□ -0.53
RHO-201ENST00000296271 STC1P52823 247 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 ART3Q13508 389 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 GRB7Q14451 532 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 C18orf21Q32NC0 220 aaPredicted RBP11.75□□□□□ -0.53
RHO-201ENST00000296271 PLA2G4EQ3MJ16 856 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 SLC8B1Q6J4K2 584 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 BNC2Q6ZN30 1099 aaPredicted RBP11.75□□□□□ -0.53
RHO-201ENST00000296271 SDCCAG8Q86SQ7 713 aaPredicted RBP11.75□□□□□ -0.53
RHO-201ENST00000296271 LMNTD2Q8IXW0 634 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 LILRA2Q8N149 483 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 CARNMT1Q8N4J0 409 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 BHLHE22Q8NFJ8 381 aaPredicted RBP11.75□□□□□ -0.53
RHO-201ENST00000296271 PXYLP1Q8TE99 480 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 NUDT8Q8WV74 236 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 FATE1Q969F0 183 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 EID2BQ96D98 161 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 GPR21Q99679 349 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 TM6SF2Q9BZW4 377 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 CWH43Q9H720 699 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 IL1RL2Q9HB29 575 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 SARS2Q9NP81 518 aaKnown RBP11.75□□□□□ -0.53
RHO-201ENST00000296271 MID1IP1Q9NPA3 183 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 UTP6Q9NYH9 597 aaKnown RBP11.75□□□□□ -0.53
RHO-201ENST00000296271 CLEC4EQ9ULY5 219 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 DNAJC15Q9Y5T4 150 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 NPEPPSL1A6NEC2 478 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 CAPN8A6NHC0 703 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 FKBP6O75344 327 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 RHOBTB1O94844 696 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 C1RP00736 705 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 RBP1P09455 135 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 CR2P20023 1033 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 CHRM3P20309 590 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 SLC11A2P49281 568 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 DSG1Q02413 1049 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 TNK2Q07912 1038 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms