RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 GRIN3AQ8TCU5 1115 aa22.82■■□□□ 1.24
PTX3-201ENST00000295927 KXD1Q9BQD3 176 aa22.82■■□□□ 1.24
PTX3-201ENST00000295927 HEPHQ9BQS7 1158 aa22.82■■□□□ 1.24
PTX3-201ENST00000295927 INTS10Q9NVR2 710 aaKnown RBP22.82■■□□□ 1.24
PTX3-201ENST00000295927 LMCD1Q9NZU5 365 aa22.82■■□□□ 1.24
PTX3-201ENST00000295927 VWA7Q9Y334 891 aa22.82■■□□□ 1.24
PTX3-201ENST00000295927 PPIL1Q9Y3C6 166 aa22.82■■□□□ 1.24
PTX3-201ENST00000295927 DENND4AQ7Z401 1863 aa22.82■■□□□ 1.24
PTX3-201ENST00000295927 CLDN7O95471 211 aa22.82■■□□□ 1.24
PTX3-201ENST00000295927 COL6A2P12110 1019 aa22.82■■□□□ 1.24
PTX3-201ENST00000295927 LAMP2P13473 410 aa22.82■■□□□ 1.24
PTX3-201ENST00000295927 XIAPP98170 497 aa22.82■■□□□ 1.24
PTX3-201ENST00000295927 KDSRQ06136 332 aa22.82■■□□□ 1.24
PTX3-201ENST00000295927 ILF2Q12905 390 aaKnown RBP22.82■■□□□ 1.24
PTX3-201ENST00000295927 CTC1Q2NKJ3 1217 aa22.82■■□□□ 1.24
PTX3-201ENST00000295927 ZNF549Q6P9A3 640 aa22.82■■□□□ 1.24
PTX3-201ENST00000295927 CHRDL2Q6WN34 429 aa22.82■■□□□ 1.24
PTX3-201ENST00000295927 TRIM42Q8IWZ5 723 aa22.82■■□□□ 1.24
PTX3-201ENST00000295927 CENPLQ8N0S6 344 aaPredicted RBP22.82■■□□□ 1.24
PTX3-201ENST00000295927 CPA6Q8N4T0 437 aa22.82■■□□□ 1.24
PTX3-201ENST00000295927 TTC8Q8TAM2 541 aa22.82■■□□□ 1.24
PTX3-201ENST00000295927 KCTD4Q8WVF5 259 aa22.82■■□□□ 1.24
PTX3-201ENST00000295927 SCRN2Q96FV2 425 aa22.82■■□□□ 1.24
PTX3-201ENST00000295927 RIPOR3Q96MK2 946 aa22.82■■□□□ 1.24
PTX3-201ENST00000295927 KLHL32Q96NJ5 620 aa22.82■■□□□ 1.24
PTX3-201ENST00000295927 LYSMD1Q96S90 227 aa22.82■■□□□ 1.24
PTX3-201ENST00000295927 MTG2Q9H4K7 406 aa22.82■■□□□ 1.24
PTX3-201ENST00000295927 CLDND1Q9NY35 253 aa22.82■■□□□ 1.24
PTX3-201ENST00000295927 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.82■■□□□ 1.24
PTX3-201ENST00000295927 ZNF106Q9H2Y7 1883 aaKnown RBP22.81■■□□□ 1.24
PTX3-201ENST00000295927 KLF11O14901 512 aa22.81■■□□□ 1.24
PTX3-201ENST00000295927 DNAJC6O75061 913 aa22.81■■□□□ 1.24
PTX3-201ENST00000295927 RUNX3Q13761 415 aa22.81■■□□□ 1.24
PTX3-201ENST00000295927 PCLAFQ15004 111 aa22.81■■□□□ 1.24
PTX3-201ENST00000295927 CHI3L2Q15782 390 aa22.81■■□□□ 1.24
PTX3-201ENST00000295927 ZRANB3Q5FWF4 1079 aa22.81■■□□□ 1.24
PTX3-201ENST00000295927 PSAPL1Q6NUJ1 521 aa22.81■■□□□ 1.24
PTX3-201ENST00000295927 LCA5Q86VQ0 697 aa22.81■■□□□ 1.24
PTX3-201ENST00000295927 PIANPQ8IYJ0 282 aa22.81■■□□□ 1.24
PTX3-201ENST00000295927 CCDC197Q8NCU1 140 aa22.81■■□□□ 1.24
PTX3-201ENST00000295927 SCG3Q8WXD2 468 aaKnown RBP22.81■■□□□ 1.24
PTX3-201ENST00000295927 GRAMD1AQ96CP6 724 aa22.81■■□□□ 1.24
PTX3-201ENST00000295927 TSPAN17Q96FV3 270 aa22.81■■□□□ 1.24
PTX3-201ENST00000295927 TSNARE1Q96NA8 513 aa22.81■■□□□ 1.24
PTX3-201ENST00000295927 TCF12Q99081 682 aa22.81■■□□□ 1.24
PTX3-201ENST00000295927 FAM96AQ9H5X1 160 aa22.81■■□□□ 1.24
PTX3-201ENST00000295927 NMRAL1Q9HBL8 299 aa22.81■■□□□ 1.24
PTX3-201ENST00000295927 CORO1CQ9ULV4 474 aaPredicted RBP22.81■■□□□ 1.24
PTX3-201ENST00000295927 RUVBL2Q9Y230 463 aaKnown RBP22.81■■□□□ 1.24
PTX3-201ENST00000295927 STARD13Q9Y3M8 1113 aa22.81■■□□□ 1.24
PTX3-201ENST00000295927 WASF2Q9Y6W5 498 aa22.81■■□□□ 1.24
PTX3-201ENST00000295927 A0A087X1B8 175 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 NPIPB15A6NHN6 443 aaPredicted RBP22.8■■□□□ 1.24
PTX3-201ENST00000295927 A8MX80 341 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 ALDH3A1P30838 453 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 CDKN2DP55273 166 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 ST8SIA6P61647 398 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 FAM45BPQ6NSW5 357 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 PARM1Q6UWI2 310 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 OTOAQ7RTW8 1153 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 SPATA21Q7Z572 469 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 TSPAN33Q86UF1 283 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 FAM45AQ8TCE6 357 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 ELSPBP1Q96BH3 223 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 PRO3102Q9H379 93 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 GTSE1Q9NYZ3 720 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 COPG2Q9UBF2 871 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 PLA2G4CQ9UP65 541 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 A0A1W2PQ67 120 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 PSMC3P17980 439 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 KCNA4P22459 653 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 SEMG2Q02383 582 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 DBN1Q16643 649 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 NAIF1Q69YI7 327 aaPredicted RBP22.8■■□□□ 1.24
PTX3-201ENST00000295927 CRTC1Q6UUV9 634 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 TPRG1Q6ZUI0 275 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 USP45Q70EL2 814 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 ZNF366Q8N895 744 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 FGF14Q92915 247 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 MCCC1Q96RQ3 725 aaPredicted RBP22.8■■□□□ 1.24
PTX3-201ENST00000295927 C19orf43Q9BQ61 176 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 TSSK1BQ9BXA7 367 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 POMKQ9H5K3 350 aa22.8■■□□□ 1.24
PTX3-201ENST00000295927 NDUFS3O75489 264 aa22.79■■□□□ 1.24
PTX3-201ENST00000295927 LEFTY1O75610 366 aa22.79■■□□□ 1.24
PTX3-201ENST00000295927 LTBRP36941 435 aa22.79■■□□□ 1.24
PTX3-201ENST00000295927 DLG1Q12959 904 aa22.79■■□□□ 1.24
PTX3-201ENST00000295927 ARSIQ5FYB1 569 aa22.79■■□□□ 1.24
PTX3-201ENST00000295927 CES4AQ5XG92 561 aa22.79■■□□□ 1.24
PTX3-201ENST00000295927 PHTF2Q8N3S3 785 aa22.79■■□□□ 1.24
PTX3-201ENST00000295927 RAB3IL1Q8TBN0 382 aa22.79■■□□□ 1.24
PTX3-201ENST00000295927 LPGAT1Q92604 370 aa22.79■■□□□ 1.24
PTX3-201ENST00000295927 NXNL1Q96CM4 212 aa22.79■■□□□ 1.24
PTX3-201ENST00000295927 BRD9Q9H8M2 597 aa22.79■■□□□ 1.24
PTX3-201ENST00000295927 USP15Q9Y4E8 981 aaPredicted RBP22.79■■□□□ 1.24
PTX3-201ENST00000295927 MUC22E2RYF6 1773 aaPredicted RBP22.79■■□□□ 1.24
PTX3-201ENST00000295927 UBA6A0AVT1 1052 aaPredicted RBP22.78■■□□□ 1.24
PTX3-201ENST00000295927 KLHL2O95198 593 aa22.78■■□□□ 1.24
PTX3-201ENST00000295927 CPA3P15088 417 aa22.78■■□□□ 1.24
PTX3-201ENST00000295927 GJA4P35212 333 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms