RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 SMARCD1Q96GM5 515 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 ASB2Q96Q27 587 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 SEZ6LQ9BYH1 1024 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 MUC13Q9H3R2 512 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 CSNK1G1Q9HCP0 422 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 SDR39U1Q9NRG7 319 aaPredicted RBP20.37■□□□□ 0.85
TMED4-201ENST00000289577 TBC1D23Q9NUY8 699 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 ADM5C9JUS6 153 aa20.36■□□□□ 0.85
TMED4-201ENST00000289577 GIPC1O14908 333 aa20.36■□□□□ 0.85
TMED4-201ENST00000289577 SMIM10L2AP0DMW4 78 aa20.36■□□□□ 0.85
TMED4-201ENST00000289577 SMIM10L2BP0DMW5 78 aa20.36■□□□□ 0.85
TMED4-201ENST00000289577 TPP2P29144 1249 aaPredicted RBP20.36■□□□□ 0.85
TMED4-201ENST00000289577 HTR7P34969 479 aa20.36■□□□□ 0.85
TMED4-201ENST00000289577 CAPRIN1Q14444 709 aaKnown RBP20.36■□□□□ 0.85
TMED4-201ENST00000289577 GRB7Q14451 532 aa20.36■□□□□ 0.85
TMED4-201ENST00000289577 CYBRD1Q53TN4 286 aa20.36■□□□□ 0.85
TMED4-201ENST00000289577 USP51Q70EK9 711 aa20.36■□□□□ 0.85
TMED4-201ENST00000289577 CPNE9Q8IYJ1 553 aa20.36■□□□□ 0.85
TMED4-201ENST00000289577 PAPD5Q8NDF8 572 aaKnown RBP20.36■□□□□ 0.85
TMED4-201ENST00000289577 PTERQ96BW5 349 aa20.36■□□□□ 0.85
TMED4-201ENST00000289577 THAP11Q96EK4 314 aa20.36■□□□□ 0.85
TMED4-201ENST00000289577 CNDP2Q96KP4 475 aaKnown RBP20.36■□□□□ 0.85
TMED4-201ENST00000289577 YTHDF1Q9BYJ9 559 aaKnown RBP20.36■□□□□ 0.85
TMED4-201ENST00000289577 POLR1BQ9H9Y6 1135 aa20.36■□□□□ 0.85
TMED4-201ENST00000289577 POLR3BQ9NW08 1133 aaPredicted RBP20.36■□□□□ 0.85
TMED4-201ENST00000289577 NYNRINQ9P2P1 1898 aaKnown RBP20.36■□□□□ 0.85
TMED4-201ENST00000289577 TCRBV5S2A0A599 114 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 KANSL1LA0AUZ9 987 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 SNAP91O60641 907 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 CLIC3O95833 236 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 S1PR4O95977 384 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 RFC2P35250 354 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 CDH13P55290 713 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 GRSF1Q12849 480 aaKnown RBP eCLIP20.35■□□□□ 0.85
TMED4-201ENST00000289577 GPR107Q5VW38 600 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 KANK2Q63ZY3 851 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 DHRSXQ8N5I4 330 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 PNPLA1Q8N8W4 532 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 OR6J1Q8NGC5 347 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 TWIST2Q8WVJ9 160 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 CATSPERBQ9H7T0 1116 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 NDFIP2Q9NV92 336 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 SMPD3Q9NY59 655 aaPredicted RBP20.35■□□□□ 0.85
TMED4-201ENST00000289577 GIMAP2Q9UG22 337 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 PTGDR2Q9Y5Y4 395 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 A0A1W2PPW3 197 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 EI24O14681 340 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 PIP5K1BO14986 540 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 SLC7A4O43246 635 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 FOXD2O60548 495 aaPredicted RBP20.35■□□□□ 0.85
TMED4-201ENST00000289577 SERPINH1P50454 418 aaKnown RBP20.35■□□□□ 0.85
TMED4-201ENST00000289577 TNK2Q07912 1038 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 AARS2Q5JTZ9 985 aaKnown RBP20.35■□□□□ 0.85
TMED4-201ENST00000289577 BLOC1S3Q6QNY0 202 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 ZNF467Q7Z7K2 595 aaPredicted RBP20.35■□□□□ 0.85
TMED4-201ENST00000289577 PTRH1Q86Y79 214 aaKnown RBP20.35■□□□□ 0.85
TMED4-201ENST00000289577 PPP1R13LQ8WUF5 828 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 TMEM125Q96AQ2 219 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 PAIP1Q9H074 479 aaKnown RBP20.35■□□□□ 0.85
TMED4-201ENST00000289577 SLC25A51Q9H1U9 297 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 SLC38A7Q9NVC3 462 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 OSER1Q9NX31 292 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 TMEM9Q9P0T7 183 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 CACNG4Q9UBN1 327 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 CDH9Q9ULB4 789 aa20.35■□□□□ 0.85
TMED4-201ENST00000289577 AZIN1O14977 448 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 ATP6V1G1O75348 118 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 CHRM3P20309 590 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 PCSK7Q16549 785 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 FGD3Q5JSP0 725 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 TMEM26Q6ZUK4 368 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 DDIASQ8IXT1 998 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 SCML4Q8N228 414 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 ZBTB8BQ8NAP8 495 aaPredicted RBP20.34■□□□□ 0.85
TMED4-201ENST00000289577 SH3RF2Q8TEC5 729 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 DNAJB3Q8WWF6 145 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 COX4I2Q96KJ9 171 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 ZFP42Q96MM3 310 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 TUBA1CQ9BQE3 449 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 TRIM54Q9BYV2 358 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 TSPYL2Q9H2G4 693 aaPredicted RBP20.34■□□□□ 0.85
TMED4-201ENST00000289577 MFSD1Q9H3U5 465 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 ZNF639Q9UID6 485 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 CLEC11AQ9Y240 323 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 TIMM13Q9Y5L4 95 aaPredicted RBP20.34■□□□□ 0.85
TMED4-201ENST00000289577 PPP6CO00743 305 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 PAGE1O75459 146 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 CD1DP15813 335 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 ZNF12P17014 697 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 ETFBP38117 255 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 FOXA1P55317 472 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 NAA20P61599 178 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 CYP51A1Q16850 503 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 KCTD8Q6ZWB6 473 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 DCP1BQ8IZD4 617 aaKnown RBP20.34■□□□□ 0.85
TMED4-201ENST00000289577 GPC2Q8N158 579 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 TSPEARQ8WU66 669 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 TUBB1Q9H4B7 451 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 DSEQ9UL01 958 aa20.34■□□□□ 0.85
TMED4-201ENST00000289577 DICER1Q9UPY3 1922 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms