RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 MARK1Q9P0L2 795 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.98■□□□□ 0.95
YBX3-202ENST00000279550 KIAA1522Q9P206 1035 aaPredicted RBP20.98■□□□□ 0.95
YBX3-202ENST00000279550 XPR1Q9UBH6 696 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 RIMKLBQ9ULI2 386 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 A0A087X1B8 175 aa20.97■□□□□ 0.95
YBX3-202ENST00000279550 TRIM13O60858 407 aa20.97■□□□□ 0.95
YBX3-202ENST00000279550 KLHL2O95198 593 aa20.97■□□□□ 0.95
YBX3-202ENST00000279550 CES1P23141 567 aa20.97■□□□□ 0.95
YBX3-202ENST00000279550 CDKN2DP55273 166 aa20.97■□□□□ 0.95
YBX3-202ENST00000279550 ELF3P78545 371 aaPredicted RBP20.97■□□□□ 0.95
YBX3-202ENST00000279550 LMAN2Q12907 356 aa20.97■□□□□ 0.95
YBX3-202ENST00000279550 LAMB3Q13751 1172 aa20.97■□□□□ 0.95
YBX3-202ENST00000279550 TRIM68Q6AZZ1 485 aa20.97■□□□□ 0.95
YBX3-202ENST00000279550 DCAF4L2Q8NA75 395 aa20.97■□□□□ 0.95
YBX3-202ENST00000279550 GPR150Q8NGU9 434 aa20.97■□□□□ 0.95
YBX3-202ENST00000279550 HEXDCQ8WVB3 486 aa20.97■□□□□ 0.95
YBX3-202ENST00000279550 PEX13Q92968 403 aa20.97■□□□□ 0.95
YBX3-202ENST00000279550 SLC7A6OSQ96CW6 309 aaPredicted RBP20.97■□□□□ 0.95
YBX3-202ENST00000279550 NMUR2Q9GZQ4 415 aa20.97■□□□□ 0.95
YBX3-202ENST00000279550 NLE1Q9NVX2 485 aaPredicted RBP20.97■□□□□ 0.95
YBX3-202ENST00000279550 CD3EAPO15446 510 aaKnown RBP20.96■□□□□ 0.95
YBX3-202ENST00000279550 LAMP2P13473 410 aa20.96■□□□□ 0.95
YBX3-202ENST00000279550 SLC8A1P32418 973 aa20.96■□□□□ 0.95
YBX3-202ENST00000279550 CCR10P46092 362 aa20.96■□□□□ 0.95
YBX3-202ENST00000279550 SLC12A2P55011 1212 aa20.96■□□□□ 0.95
YBX3-202ENST00000279550 RHOAP61586 193 aa20.96■□□□□ 0.95
YBX3-202ENST00000279550 DHCR24Q15392 516 aa20.96■□□□□ 0.95
YBX3-202ENST00000279550 ZNF549Q6P9A3 640 aa20.96■□□□□ 0.95
YBX3-202ENST00000279550 VITQ6UXI7 678 aa20.96■□□□□ 0.95
YBX3-202ENST00000279550 GABPB2Q8TAK5 448 aaPredicted RBP20.96■□□□□ 0.95
YBX3-202ENST00000279550 PIWIL2Q8TC59 973 aaKnown RBP20.96■□□□□ 0.95
YBX3-202ENST00000279550 NECTIN4Q96NY8 510 aa20.96■□□□□ 0.95
YBX3-202ENST00000279550 WWP1Q9H0M0 922 aa20.96■□□□□ 0.95
YBX3-202ENST00000279550 SAR1AQ9NR31 198 aa20.96■□□□□ 0.95
YBX3-202ENST00000279550 MID2Q9UJV3 735 aa20.96■□□□□ 0.95
YBX3-202ENST00000279550 ARIH1Q9Y4X5 557 aaPredicted RBP20.96■□□□□ 0.95
YBX3-202ENST00000279550 DOCK8Q8NF50 2099 aa20.96■□□□□ 0.95
YBX3-202ENST00000279550 DLX3O60479 287 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 WISP3O95389 354 aaPredicted RBP20.95■□□□□ 0.94
YBX3-202ENST00000279550 CYP17A1P05093 508 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 KRT16P08779 473 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 HLA-FP30511 346 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 CD70P32970 193 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 TUBB3Q13509 450 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 INO80DQ53TQ3 878 aaPredicted RBP20.95■□□□□ 0.94
YBX3-202ENST00000279550 LMNTD2Q8IXW0 634 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 CDKN2AIPNLQ96HQ2 116 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 ZFYVE19Q96K21 471 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 LMLNQ96KR4 655 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 LRMDAQ9H2I8 198 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 ABCB8Q9NUT2 735 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 THG1LQ9NWX6 298 aaKnown RBP20.95■□□□□ 0.94
YBX3-202ENST00000279550 CD207Q9UJ71 328 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 ANKRD36A6QL64 1941 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 UNC80Q8N2C7 3258 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 DENND4AQ7Z401 1863 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 A0A0U1RQS6 177 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 TMEM114B3SHH9 223 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 ZNF195O14628 629 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 SMAD6O43541 496 aaKnown RBP20.95■□□□□ 0.94
YBX3-202ENST00000279550 ATP5HO75947 161 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 CRTAMO95727 393 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 SLC4A1P02730 911 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 BMP1P13497 986 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 ABL2P42684 1182 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 TAF1AQ15573 450 aaPredicted RBP20.95■□□□□ 0.94
YBX3-202ENST00000279550 CYB5D1Q6P9G0 228 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 TMEM207Q6UWW9 146 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 GLT6D1Q7Z4J2 308 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.95■□□□□ 0.94
YBX3-202ENST00000279550 ZNF557Q8N988 423 aaPredicted RBP20.95■□□□□ 0.94
YBX3-202ENST00000279550 OR4K2Q8NGD2 314 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 OR4L1Q8NH43 312 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 PPP4R1Q8TF05 950 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 SUSD6Q92537 303 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 PTCD3Q96EY7 689 aaKnown RBP20.95■□□□□ 0.94
YBX3-202ENST00000279550 FAM83CQ9BQN1 747 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 C2orf49Q9BVC5 232 aaPredicted RBP20.95■□□□□ 0.94
YBX3-202ENST00000279550 CATSPERZQ9NTU4 200 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 ARMCX1Q9P291 453 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 CRYL1Q9Y2S2 319 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 VWA7Q9Y334 891 aa20.95■□□□□ 0.94
YBX3-202ENST00000279550 H3BQ06 376 aaPredicted RBP20.94■□□□□ 0.94
YBX3-202ENST00000279550 HSPA4LO95757 839 aa20.94■□□□□ 0.94
YBX3-202ENST00000279550 ADH1CP00326 375 aa20.94■□□□□ 0.94
YBX3-202ENST00000279550 ARSAP15289 507 aa20.94■□□□□ 0.94
YBX3-202ENST00000279550 PSMA3P25788 255 aa20.94■□□□□ 0.94
YBX3-202ENST00000279550 TIAL1Q01085 375 aaKnown RBP eCLIP20.94■□□□□ 0.94
YBX3-202ENST00000279550 FCHO2Q0JRZ9 810 aa20.94■□□□□ 0.94
YBX3-202ENST00000279550 CSHL1Q14406 222 aa20.94■□□□□ 0.94
YBX3-202ENST00000279550 TSNAXIP1Q2TAA8 658 aa20.94■□□□□ 0.94
YBX3-202ENST00000279550 PLEKHG6Q3KR16 790 aa20.94■□□□□ 0.94
YBX3-202ENST00000279550 PIM3Q86V86 326 aa20.94■□□□□ 0.94
YBX3-202ENST00000279550 TTC30BQ8N4P2 665 aa20.94■□□□□ 0.94
YBX3-202ENST00000279550 ZNF781Q8N8C0 355 aa20.94■□□□□ 0.94
YBX3-202ENST00000279550 PDCD6IPQ8WUM4 868 aaKnown RBP20.94■□□□□ 0.94
YBX3-202ENST00000279550 ANKRD49Q8WVL7 239 aa20.94■□□□□ 0.94
YBX3-202ENST00000279550 UTP4Q969X6 686 aaKnown RBP20.94■□□□□ 0.94
YBX3-202ENST00000279550 SGF29Q96ES7 293 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms