RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 NPWQ8N729 165 aa15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 CNTD1Q8N815 330 aa15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 FCRL3Q96P31 734 aaPredicted RBP15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 RBBP8Q99708 897 aa15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 SUCOQ9UBS9 1254 aaKnown RBP15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 SFMBT1Q9UHJ3 866 aa15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 POU2F3Q9UKI9 436 aa15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TMEM233B4DJY2 109 aa15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 SLC22A2O15244 555 aa15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 C2P06681 752 aa15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 HDCP19113 662 aa15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 JAK1P23458 1154 aa15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 MAGEA12P43365 314 aa15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ARPC4P59998 168 aa15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TPI1P60174 286 aa15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 PRKCQQ04759 706 aa15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 NSUN2Q08J23 767 aaKnown RBP eCLIP15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TRAF2Q12933 501 aa15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 VASH1Q7L8A9 365 aaPredicted RBP15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 LRRTM3Q86VH5 581 aa15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 CADM3Q8N126 398 aa15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 RNF34Q969K3 372 aa15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 CELF6Q96J87 481 aaKnown RBP15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 APOL2Q9BQE5 337 aa15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 CCDC68Q9H2F9 335 aa15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TMEM39AQ9NV64 488 aa15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 SMOXQ9NWM0 555 aa15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TMA7Q9Y2S6 64 aaKnown RBP15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 PRORSD1PA6NEY8 169 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 PFDN6O15212 129 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 AKAP10O43572 662 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 CLIC3O95833 236 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 MLNP12872 115 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 NAB1Q13506 487 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 BFSP2Q13515 415 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 RAB39AQ14964 217 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 BNIPLQ7Z465 357 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TKTL2Q9H0I9 626 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 SIK2Q9H0K1 926 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 UBP1Q9NZI7 540 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 KLHL8Q9P2G9 620 aaPredicted RBP15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TRIM64CA6NLI5 447 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ZNF839A8K0R7 811 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 HHLA1C9JL84 531 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 DCLK1O15075 740 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 POLBP06746 335 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 HSPA1AP0DMV8 641 aaKnown RBP15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 HSPA1BP0DMV9 641 aaKnown RBP15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ARSAP15289 507 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 SLC7A1P30825 629 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 SPRP35270 261 aaPredicted RBP15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 GLRBP48167 497 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ARPP19P56211 112 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TUSC3Q13454 348 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 NOMO2Q5JPE7 1267 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 SDHAF4Q5VUM1 108 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 GALNT18Q6P9A2 607 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ABI1Q8IZP0 508 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 OR10T2Q8NGX3 314 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 URGCPQ8TCY9 931 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 COLEC11Q9BWP8 271 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ACE2Q9BYF1 805 aaPredicted RBP15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 KLHL25Q9H0H3 589 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 WDCPQ9H6R7 721 aa15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 SPTBN5Q9NRC6 3674 aaKnown RBP15.97■□□□□ 0.15
MAP1LC3B-201ENST00000268607 CSF2RAP15509 400 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 SAT1P21673 171 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ADSLP30566 484 aaPredicted RBP15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 PGFP49763 221 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 LIMK2P53671 638 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 CLEC14AQ86T13 490 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 IGFN1Q86VF2 1251 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ZC3H7AQ8IWR0 971 aaKnown RBP15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TMEM86AQ8N2M4 240 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 OR52K1Q8NGK4 314 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 GPR152Q8TDT2 470 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TRUB1Q8WWH5 349 aaKnown RBP15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 VWCEQ96DN2 955 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TASP1Q9H6P5 420 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 PALMDQ9NP74 551 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 CNGB3Q9NQW8 809 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 DAPK2Q9UIK4 370 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 CDH9Q9ULB4 789 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 PCDHB7Q9Y5E2 793 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 CCDC78A2IDD5 438 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 HEATR9A2RTY3 570 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 HACD1B0YJ81 288 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ZBTB17Q13105 803 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 PPP4R4Q6NUP7 873 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 LAYNQ6UX15 382 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 CBR4Q8N4T8 237 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 SNX31Q8N9S9 440 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ADAMTS16Q8TE57 1224 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ACDQ96AP0 544 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 SMARCD1Q96GM5 515 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 CCDC138Q96M89 665 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 HERC2P3Q9BVR0 1158 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 POLR1BQ9H9Y6 1135 aa15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 GMPR2Q9P2T1 348 aaKnown RBP15.96■□□□□ 0.15
MAP1LC3B-201ENST00000268607 OR12D3Q9UGF7 316 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms