RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 GLYATQ6IB77 296 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 GPR142Q7Z601 462 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 RNF180Q86T96 592 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 GPSM1Q86YR5 675 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 STYXL1Q9Y6J8 313 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 GSTM1P09488 218 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 RABGGTBP53611 331 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 NCF4Q15080 339 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 SH3D19Q5HYK7 790 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 ZNF57Q68EA5 555 aaPredicted RBP11.56□□□□□ -0.56
VPS33A-201ENST00000267199 C11orf96Q7Z7L8 435 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 ZNF605Q86T29 641 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 CDH24Q86UP0 819 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 FAR1Q8WVX9 515 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 OTUB1Q96FW1 271 aaPredicted RBP11.56□□□□□ -0.56
VPS33A-201ENST00000267199 GMLQ99445 158 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 STRA6Q9BX79 667 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 GIN1Q9NXP7 522 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 TRPM5Q9NZQ8 1165 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 SNX10Q9Y5X0 201 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.55□□□□□ -0.56
VPS33A-201ENST00000267199 FAM25AB3EWG3 89 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 FAM25CB3EWG5 89 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 FAM25GB3EWG6 89 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 H3BN98 237 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 MSI1O43347 362 aaKnown RBP11.55□□□□□ -0.56
VPS33A-201ENST00000267199 LRIG2O94898 1065 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 KCNH1O95259 989 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 S100A1P23297 94 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 ALDH7A1P49419 539 aaKnown RBP11.55□□□□□ -0.56
VPS33A-201ENST00000267199 RPL38P63173 70 aaKnown RBP11.55□□□□□ -0.56
VPS33A-201ENST00000267199 KCNJ11Q14654 390 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 PCBP1Q15365 356 aaKnown RBP eCLIP11.55□□□□□ -0.56
VPS33A-201ENST00000267199 DPYSL2Q16555 572 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 SOWAHAQ2M3V2 549 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 PLEKHG4Q58EX7 1191 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 GATAD2AQ86YP4 633 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 DENND6AQ8IWF6 608 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 C19orf60Q96EN9 201 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 HDHD2Q9H0R4 259 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 CATSPERZQ9NTU4 200 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 ZNF112Q9UJU3 913 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 VWA7Q9Y334 891 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 IPO13O94829 963 aaKnown RBP11.55□□□□□ -0.56
VPS33A-201ENST00000267199 MBL2P11226 248 aaPredicted RBP11.55□□□□□ -0.56
VPS33A-201ENST00000267199 PRDX6P30041 224 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 LILRA4P59901 499 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 ALDH6A1Q02252 535 aaKnown RBP11.55□□□□□ -0.56
VPS33A-201ENST00000267199 THAP5Q7Z6K1 395 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 RELL1Q8IUW5 271 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 DENND1AQ8TEH3 1009 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 ASB2Q96Q27 587 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 SYT11Q9BT88 431 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 UXTQ9UBK9 157 aaPredicted RBP11.55□□□□□ -0.56
VPS33A-201ENST00000267199 MGAT4DA6NG13 374 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 G3V2T6 193 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 MAGEB3O15480 346 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 MT-CYBP00156 380 aaPredicted RBP11.55□□□□□ -0.56
VPS33A-201ENST00000267199 KRT6AP02538 564 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 KRT6BP04259 564 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 ZNF12P17014 697 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 HOXB8P17481 243 aaPredicted RBP11.55□□□□□ -0.56
VPS33A-201ENST00000267199 KRT6CP48668 564 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 CRYBB1P53674 252 aaPredicted RBP11.55□□□□□ -0.56
VPS33A-201ENST00000267199 LIPEQ05469 1076 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 SLC18A2Q05940 514 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 TOP3AQ13472 1001 aaPredicted RBP11.55□□□□□ -0.56
VPS33A-201ENST00000267199 C1DQ13901 141 aaKnown RBP11.55□□□□□ -0.56
VPS33A-201ENST00000267199 CGB2Q6NT52 195 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 GANCQ8TET4 914 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 CENPNQ96H22 339 aaPredicted RBP11.55□□□□□ -0.56
VPS33A-201ENST00000267199 FAM105AQ9NUU6 356 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 SIX4Q9UIU6 781 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 CDV3Q9UKY7 258 aaKnown RBP11.55□□□□□ -0.56
VPS33A-201ENST00000267199 GPC6Q9Y625 555 aaPredicted RBP11.55□□□□□ -0.56
VPS33A-201ENST00000267199 TAF1P21675 1872 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 VPS4BO75351 444 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 PAGE1O75459 146 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 PGK1P00558 417 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 CKMP06732 381 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 ANXA6P08133 673 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 PABPC4LP0CB38 370 aaKnown RBP11.55□□□□□ -0.56
VPS33A-201ENST00000267199 FGFR1P11362 822 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 PTPN3P26045 913 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 RRM2P31350 389 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 GRK3P35626 688 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 PPP1R8Q12972 351 aaKnown RBP11.55□□□□□ -0.56
VPS33A-201ENST00000267199 ZYG11AQ6WRX3 759 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 NRG4Q8WWG1 115 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 FOPNLQ96NB1 174 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 TPK1Q9H3S4 243 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 ALG2Q9H553 416 aa11.55□□□□□ -0.56
VPS33A-201ENST00000267199 KPNA6O60684 536 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 OAS1P00973 400 aaKnown RBP11.54□□□□□ -0.56
VPS33A-201ENST00000267199 ALDH2P05091 517 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 MMP3P08254 477 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 ALOX5P09917 674 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 MTHFD1P11586 935 aaKnown RBP11.54□□□□□ -0.56
VPS33A-201ENST00000267199 NMBRP28336 390 aa11.54□□□□□ -0.56
VPS33A-201ENST00000267199 MTHFRP42898 656 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms