RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 ZNF549Q6P9A3 640 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 C12orf40Q86WS4 652 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 SPNS2Q8IVW8 549 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 FSTL5Q8N475 847 aaPredicted RBP11.55□□□□□ -0.56
SCAF11-201ENST00000266589 RFWD2Q8NHY2 731 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 UNKQ9C0B0 810 aaKnown RBP11.55□□□□□ -0.56
SCAF11-201ENST00000266589 C20orf27Q9GZN8 174 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 EBF3Q9H4W6 596 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 SUV39H2Q9H5I1 410 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 GPAMQ9HCL2 828 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 THAP1Q9NVV9 213 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 GDE1Q9NZC3 331 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 XPR1Q9UBH6 696 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 DCTN4Q9UJW0 460 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 FBXO10Q9UK96 956 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 RRP15Q9Y3B9 282 aaKnown RBP11.55□□□□□ -0.56
SCAF11-201ENST00000266589 USH1CQ9Y6N9 552 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 UBA6A0AVT1 1052 aaPredicted RBP11.55□□□□□ -0.56
SCAF11-201ENST00000266589 HEPACAM2A8MVW5 462 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 TGDSO95455 350 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 NFATC1O95644 943 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 POP4O95707 220 aaKnown RBP11.55□□□□□ -0.56
SCAF11-201ENST00000266589 SERPINE1P05121 402 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 MYL2P10916 166 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 RALBP11234 206 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 FDXRP22570 491 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 HNF1BP35680 557 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 HYAL1Q12794 435 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 PEX6Q13608 980 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 ITGA9Q13797 1035 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 CSHL1Q14406 222 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 ZRANB3Q5FWF4 1079 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 PIM3Q86V86 326 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 CHST14Q8NCH0 376 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 RDH11Q8TC12 318 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 SCG3Q8WXD2 468 aaKnown RBP11.55□□□□□ -0.56
SCAF11-201ENST00000266589 MRGPRX3Q96LB0 322 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 GPR78Q96P69 363 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 CPEB1Q9BZB8 566 aaKnown RBP11.55□□□□□ -0.56
SCAF11-201ENST00000266589 CIPCQ9C0C6 399 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 FAM96AQ9H5X1 160 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 ZFYVE1Q9HBF4 777 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 KIF26AQ9ULI4 1882 aaPredicted RBP11.54□□□□□ -0.56
SCAF11-201ENST00000266589 A0A0G2JND7 137 aa11.54□□□□□ -0.56
SCAF11-201ENST00000266589 HGSO14964 777 aaPredicted RBP11.54□□□□□ -0.56
SCAF11-201ENST00000266589 NDUFS3O75489 264 aa11.54□□□□□ -0.56
SCAF11-201ENST00000266589 LYPLA1O75608 230 aaPredicted RBP11.54□□□□□ -0.56
SCAF11-201ENST00000266589 CLDN7O95471 211 aa11.54□□□□□ -0.56
SCAF11-201ENST00000266589 UGT2B4P06133 528 aa11.54□□□□□ -0.56
SCAF11-201ENST00000266589 SBK3P0C264 359 aa11.54□□□□□ -0.56
SCAF11-201ENST00000266589 CISD3P0C7P0 127 aa11.54□□□□□ -0.56
SCAF11-201ENST00000266589 CCDC166P0CW27 439 aa11.54□□□□□ -0.56
SCAF11-201ENST00000266589 HOXB8P17481 243 aaPredicted RBP11.54□□□□□ -0.56
SCAF11-201ENST00000266589 GRK2P25098 689 aa11.54□□□□□ -0.56
SCAF11-201ENST00000266589 RECQLP46063 649 aaPredicted RBP11.54□□□□□ -0.56
SCAF11-201ENST00000266589 SLC1A6P48664 564 aa11.54□□□□□ -0.56
SCAF11-201ENST00000266589 KPNA2P52292 529 aaKnown RBP11.54□□□□□ -0.56
SCAF11-201ENST00000266589 ANKRD54Q6NXT1 300 aa11.54□□□□□ -0.56
SCAF11-201ENST00000266589 SYCE2Q6PIF2 218 aa11.54□□□□□ -0.56
SCAF11-201ENST00000266589 ZYG11AQ6WRX3 759 aa11.54□□□□□ -0.56
SCAF11-201ENST00000266589 CRLF3Q8IUI8 442 aa11.54□□□□□ -0.56
SCAF11-201ENST00000266589 PIANPQ8IYJ0 282 aa11.54□□□□□ -0.56
SCAF11-201ENST00000266589 TMEM151AQ8N4L1 468 aa11.54□□□□□ -0.56
SCAF11-201ENST00000266589 OR2A12Q8NGT7 310 aa11.54□□□□□ -0.56
SCAF11-201ENST00000266589 GRIN3AQ8TCU5 1115 aa11.54□□□□□ -0.56
SCAF11-201ENST00000266589 ZNF398Q8TD17 642 aa11.54□□□□□ -0.56
SCAF11-201ENST00000266589 HEXDCQ8WVB3 486 aa11.54□□□□□ -0.56
SCAF11-201ENST00000266589 SREK1Q8WXA9 508 aaKnown RBP11.54□□□□□ -0.56
SCAF11-201ENST00000266589 LPGAT1Q92604 370 aa11.54□□□□□ -0.56
SCAF11-201ENST00000266589 TIFAQ96CG3 184 aa11.54□□□□□ -0.56
SCAF11-201ENST00000266589 ECHDC3Q96DC8 303 aa11.54□□□□□ -0.56
SCAF11-201ENST00000266589 TCF12Q99081 682 aa11.54□□□□□ -0.56
SCAF11-201ENST00000266589 AARSD1Q9BTE6 412 aaKnown RBP11.54□□□□□ -0.56
SCAF11-201ENST00000266589 KDM4CQ9H3R0 1056 aa11.54□□□□□ -0.56
SCAF11-201ENST00000266589 NSUN3Q9H649 340 aaKnown RBP11.54□□□□□ -0.56
SCAF11-201ENST00000266589 IGSF5Q9NSI5 407 aa11.54□□□□□ -0.56
SCAF11-201ENST00000266589 NPIPB15A6NHN6 443 aaPredicted RBP11.53□□□□□ -0.56
SCAF11-201ENST00000266589 A8MX80 341 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 TTC34A8MYJ7 566 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.53□□□□□ -0.56
SCAF11-201ENST00000266589 GPR39O43194 453 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 ITM2AO43736 263 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 TRIM13O60858 407 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 TULP3O75386 442 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 WISP3O95389 354 aaPredicted RBP11.53□□□□□ -0.56
SCAF11-201ENST00000266589 LTA4HP09960 611 aaKnown RBP11.53□□□□□ -0.56
SCAF11-201ENST00000266589 FCARP24071 287 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 FMO4P31512 558 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 NNMTP40261 264 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 TTPAP49638 278 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 XIAPP98170 497 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 CDKN3Q16667 212 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 FAM83EQ2M2I3 478 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 SPRED3Q2MJR0 410 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 AARS2Q5JTZ9 985 aaKnown RBP11.53□□□□□ -0.56
SCAF11-201ENST00000266589 AGAP9Q5VTM2 703 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 TMEM184AQ6ZMB5 413 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 CCDC91Q7Z6B0 441 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 WFIKKN2Q8TEU8 576 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 FRS2Q8WU20 508 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms