RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 SQORQ9Y6N5 450 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 SOWAHBA6NEL2 793 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 TFECO14948 347 aaPredicted RBP17.1■□□□□ 0.33
SRF-201ENST00000265354 PRKCGP05129 697 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 GNAO1P09471 354 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 SLC5A2P31639 672 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 CPOXP36551 454 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 VGLL4Q14135 290 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 SEPT8Q92599 483 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 DHRS4Q9BTZ2 278 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 MROH8Q9H579 483 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 PRORSD1PA6NEY8 169 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 FKBP1AP62942 108 aaKnown RBP17.1■□□□□ 0.33
SRF-201ENST00000265354 PRKG2Q13237 762 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 LAPTM5Q13571 262 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 FGD3Q5JSP0 725 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 C9orf57Q5W0N0 161 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 IFNLR1Q8IU57 520 aaPredicted RBP17.1■□□□□ 0.33
SRF-201ENST00000265354 MIR1-1HGQ9H1L0 117 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 ACTR8Q9H981 624 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 GLOD4Q9HC38 313 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 EMCNQ9ULC0 261 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 SMIM28A0A1B0GU29 152 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 MTHFRP42898 656 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 HARS2P49590 506 aaKnown RBP17.1■□□□□ 0.33
SRF-201ENST00000265354 OAZ1P54368 228 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 DEFA1P59665 94 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 DEFA3P59666 94 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 LAPTM4AQ15012 233 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 DGUOKQ16854 277 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 OGFRL1Q5TC84 451 aaPredicted RBP17.1■□□□□ 0.33
SRF-201ENST00000265354 HS6ST3Q8IZP7 471 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 SPPL2AQ8TCT8 520 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 ISOC1Q96CN7 298 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 ITM2CQ9NQX7 267 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 CACNA2D2Q9NY47 1150 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 IFT80Q9P2H3 777 aaPredicted RBP17.1■□□□□ 0.33
SRF-201ENST00000265354 CNTN6Q9UQ52 1028 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 MYBPHLA2RUH7 354 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 IDH3BO43837 385 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 IL7RP16871 459 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 CDK9P50750 372 aaKnown RBP17.1■□□□□ 0.33
SRF-201ENST00000265354 RPL38P63173 70 aaKnown RBP17.1■□□□□ 0.33
SRF-201ENST00000265354 PTPRCAPQ14761 206 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 FKBP1CQ5VVH2 108 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 TTC23Q5W5X9 447 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 PRMT9Q6P2P2 845 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 ZC3H7AQ8IWR0 971 aaKnown RBP17.1■□□□□ 0.33
SRF-201ENST00000265354 TXNDC5Q8NBS9 432 aaKnown RBP17.1■□□□□ 0.33
SRF-201ENST00000265354 RDH11Q8TC12 318 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 DUSP16Q9BY84 665 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 AKTIPQ9H8T0 292 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 PHF24Q9UPV7 400 aa17.1■□□□□ 0.33
SRF-201ENST00000265354 CROCCQ5TZA2 2017 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 RECQL5O94762 991 aaPredicted RBP17.09■□□□□ 0.33
SRF-201ENST00000265354 FADS2O95864 444 aaKnown RBP17.09■□□□□ 0.33
SRF-201ENST00000265354 PRKACGP22612 351 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 AP5B1Q2VPB7 878 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 DEPDC1Q5TB30 811 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 CDK15Q96Q40 435 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 CENPOQ9BU64 300 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 PRKD2Q9BZL6 878 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 SLC22A3O75751 556 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 PTPN9P43378 593 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 CMPK2Q5EBM0 449 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 TIGD7Q6NT04 549 aaPredicted RBP17.09■□□□□ 0.33
SRF-201ENST00000265354 FZD8Q9H461 694 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 POLE4Q9NR33 117 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 IRS2Q9Y4H2 1338 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 H0Y858 1186 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 B4GAT1O43505 415 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 FBXO21O94952 628 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 SNAP29O95721 258 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 ELK4P28324 431 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 AQP1P29972 269 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 SCNN1GP51170 649 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 MAPKAPK3Q16644 382 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 GNASQ5JWF2 1037 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 NECAB2Q7Z6G3 386 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 ADGRG6Q86SQ4 1221 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 CPSF7Q8N684 471 aaKnown RBP17.09■□□□□ 0.33
SRF-201ENST00000265354 TERB1Q8NA31 727 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 SMYD1Q8NB12 490 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 MZB1Q8WU39 189 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 FZD10Q9ULW2 581 aa17.09■□□□□ 0.33
SRF-201ENST00000265354 C2orf81A6NN90 581 aa17.08■□□□□ 0.33
SRF-201ENST00000265354 RAD51BO15315 384 aa17.08■□□□□ 0.33
SRF-201ENST00000265354 RAMP2O60895 175 aa17.08■□□□□ 0.33
SRF-201ENST00000265354 BEX3Q00994 111 aa17.08■□□□□ 0.33
SRF-201ENST00000265354 CACHD1Q5VU97 1274 aa17.08■□□□□ 0.33
SRF-201ENST00000265354 ZNF621Q6ZSS3 439 aa17.08■□□□□ 0.33
SRF-201ENST00000265354 GPSM1Q86YR5 675 aa17.08■□□□□ 0.33
SRF-201ENST00000265354 STAG3L4Q8TBR4 150 aa17.08■□□□□ 0.33
SRF-201ENST00000265354 ZHX1-C8orf76Q96EF9 292 aa17.08■□□□□ 0.33
SRF-201ENST00000265354 NMRK2Q9NPI5 230 aa17.08■□□□□ 0.33
SRF-201ENST00000265354 ADGRE2Q9UHX3 823 aa17.08■□□□□ 0.33
SRF-201ENST00000265354 G3V2T6 193 aa17.08■□□□□ 0.32
SRF-201ENST00000265354 SERPINF2P08697 491 aa17.08■□□□□ 0.32
SRF-201ENST00000265354 ZBED5Q49AG3 693 aa17.08■□□□□ 0.32
SRF-201ENST00000265354 AARS2Q5JTZ9 985 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms