RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 GPR22Q99680 433 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 HEPHQ9BQS7 1158 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 TRIM54Q9BYV2 358 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 MFSD1Q9H3U5 465 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 ZDHHC7Q9NXF8 308 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 MARCH4Q9P2E8 410 aaPredicted RBP9.31□□□□□ -0.92
SSR3-201ENST00000265044 CLEC4EQ9ULY5 219 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 ZNF711Q9Y462 761 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 GLYATL1P3A0A0U1RQE8 302 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 E9PBE3 544 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 BIRC5O15392 142 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 KLHL41O60662 606 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 STAMBPO95630 424 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 EPHX1P07099 455 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 HIST1H2AGP0C0S8 130 aaPredicted RBP9.31□□□□□ -0.92
SSR3-201ENST00000265044 CYP2A6P11509 494 aaPredicted RBP9.31□□□□□ -0.92
SSR3-201ENST00000265044 PKMP14618 531 aaKnown RBP9.31□□□□□ -0.92
SSR3-201ENST00000265044 HNRNPLP14866 589 aaKnown RBP eCLIP9.31□□□□□ -0.92
SSR3-201ENST00000265044 HIST1H2ADP20671 130 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 HLA-FP30511 346 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 STX1BP61266 288 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 HSPA14Q0VDF9 509 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 USP4Q13107 963 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 PTPRRQ15256 657 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 MYLK3Q32MK0 819 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 FBXO48Q5FWF7 155 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 DENND5AQ6IQ26 1287 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 STK40Q8N2I9 435 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 ZNF276Q8N554 614 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 RFWD2Q8NHY2 731 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 DENND1AQ8TEH3 1009 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 HEXDCQ8WVB3 486 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 HIST1H2AHQ96KK5 128 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 GPR21Q99679 349 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 HIST1H2AJQ99878 128 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 MRPL57Q9BQC6 102 aaKnown RBP9.31□□□□□ -0.92
SSR3-201ENST00000265044 H2AFJQ9BTM1 129 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 DHRS4Q9BTZ2 278 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 SPO11Q9Y5K1 396 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 NEMP2A6NFY4 417 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 STK25O00506 426 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 PRMT5O14744 637 aaPredicted RBP9.31□□□□□ -0.92
SSR3-201ENST00000265044 CIB2O75838 187 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 PRSS56P0CW18 603 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 HOXB8P17481 243 aaPredicted RBP9.31□□□□□ -0.92
SSR3-201ENST00000265044 PBLDP30039 288 aaPredicted RBP9.31□□□□□ -0.92
SSR3-201ENST00000265044 SLC18A1P54219 525 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 EIF4EBP2Q13542 120 aaPredicted RBP9.31□□□□□ -0.92
SSR3-201ENST00000265044 DHCR24Q15392 516 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 SLC5A9Q2M3M2 681 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 KIF19Q2TAC6 998 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 ZNF789Q5FWF6 425 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 ARSIQ5FYB1 569 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 SEL1L3Q68CR1 1132 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 PIM3Q86V86 326 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 MYO1HQ8N1T3 1032 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 PGBD3Q8N328 593 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 CSGALNACT1Q8TDX6 532 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 STMN2Q93045 179 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 TUBB6Q9BUF5 446 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 NUF2Q9BZD4 464 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 SFXN1Q9H9B4 322 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 PFDN4Q9NQP4 134 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 PKD2L2Q9NZM6 624 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 TRIM33Q9UPN9 1127 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 MICAL3Q7RTP6 2002 aa9.31□□□□□ -0.92
SSR3-201ENST00000265044 SPECC1L-ADORA2AF8WAN1 911 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 CFLARO15519 480 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 RNASEH1O60930 286 aaKnown RBP9.3□□□□□ -0.92
SSR3-201ENST00000265044 HLA-EP13747 358 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 ADRA1AP35348 466 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 SCTRP47872 440 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 NEK3P51956 506 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 CDH13P55290 713 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 SYTL3Q4VX76 610 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 TMEM150AQ86TG1 271 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 AHI1Q8N157 1196 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 FBXO39Q8N4B4 442 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 RMDN2Q96LZ7 410 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 MTG2Q9H4K7 406 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 PNPOQ9NVS9 261 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 IRAK3Q9Y616 596 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 HEPACAM2A8MVW5 462 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 ATP5HO75947 161 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 KLHL2O95198 593 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 PAPSS2O95340 614 aaPredicted RBP9.3□□□□□ -0.92
SSR3-201ENST00000265044 CBX6O95503 412 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 ATP5F1P24539 256 aaPredicted RBP9.3□□□□□ -0.92
SSR3-201ENST00000265044 GDI1P31150 447 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 ERFP50548 548 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 TNFAIP8L3Q5GJ75 292 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 SH2D4BQ5SQS7 431 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 AFMIDQ63HM1 303 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 TIFABQ6ZNK6 161 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 TEX26Q8N6G2 289 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 FGF13Q92913 245 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 ZSWIM3Q96MP5 696 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 COPS8Q99627 209 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 MYLK2Q9H1R3 596 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 CCDC134Q9H6E4 229 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms