RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 CAPN8A6NHC0 703 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 LRIG2O94898 1065 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 RLN1P04808 185 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 NOMO3P69849 1222 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 OR6K2Q8NGY2 324 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 OR10G6Q8NH81 332 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 FOXO6A8MYZ6 492 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 GTF2BQ00403 316 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 ALKBH2Q6NS38 261 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 TP53INP1Q96A56 240 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 KLHL5Q96PQ7 755 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 TPK1Q9H3S4 243 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 ERVK-5Q9HDB9 667 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 KCNMB3Q9NPA1 279 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 MCIDASD6RGH6 385 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 SCN2BO60939 215 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 ERBB2P04626 1255 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 CYP3A4P08684 503 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 TCF4P15884 667 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 BHLHB9Q6PI77 547 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 TRABD2AQ86V40 505 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 PQLC1Q8N2U9 271 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 NKX2-3Q8TAU0 364 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 HAS1Q92839 578 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 C18orf25Q96B23 403 aaPredicted RBP17.98■□□□□ 0.47
COL5A3-201ENST00000264828 PPCDCQ96CD2 204 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 MYOCQ99972 504 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 INTS7Q9NVH2 962 aaKnown RBP17.98■□□□□ 0.47
COL5A3-201ENST00000264828 DHRS7Q9Y394 339 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 TRAF6Q9Y4K3 522 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 ISM1B1AKI9 464 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 PGRMC2O15173 223 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 BMP6P22004 513 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 LYPLAL1Q5VWZ2 237 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 CXorf57Q6NSI4 855 aaKnown RBP17.98■□□□□ 0.47
COL5A3-201ENST00000264828 FBXL16Q8N461 479 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 ZNF607Q96SK3 696 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 ACO2Q99798 780 aaKnown RBP17.98■□□□□ 0.47
COL5A3-201ENST00000264828 RPTORQ8N122 1335 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 PSMD10O75832 226 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 GJB1P08034 283 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 CTSKP43235 329 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 TRIM40Q6P9F5 258 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 CRTC3Q6UUV7 619 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 C2orf73Q8N5S3 287 aaPredicted RBP17.98■□□□□ 0.47
COL5A3-201ENST00000264828 TMEM161BQ8NDZ6 487 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 CORO1BQ9BR76 489 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 EQTNQ9NQ60 294 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 PRDM4Q9UKN5 801 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 PMF1-BGLAPU3KQ54 211 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 BPGMP07738 259 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 CBX3Q13185 183 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 ALG11Q2TAA5 492 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 CELF3Q5SZQ8 465 aaKnown RBP17.98■□□□□ 0.47
COL5A3-201ENST00000264828 PIK3R6Q5UE93 754 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 FBXO42Q6P3S6 717 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 BORCS5Q969J3 196 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 C1GALT1C1Q96EU7 318 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 TRNT1Q96Q11 434 aaKnown RBP17.98■□□□□ 0.47
COL5A3-201ENST00000264828 MCMBPQ9BTE3 642 aa17.98■□□□□ 0.47
COL5A3-201ENST00000264828 AARSD1Q9BTE6 412 aaKnown RBP17.98■□□□□ 0.47
COL5A3-201ENST00000264828 R3HDM2Q9Y2K5 976 aaKnown RBP17.98■□□□□ 0.47
COL5A3-201ENST00000264828 YDJCA8MPS7 323 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 CYP2C18P33260 490 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 DPYSQ14117 519 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 ADAMTSL2Q86TH1 951 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 RGL4Q8IZJ4 473 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 NEK7Q8TDX7 302 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 ACAT2Q9BWD1 397 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 GSDMCQ9BYG8 508 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 C12orf65Q9H3J6 166 aaKnown RBP17.97■□□□□ 0.47
COL5A3-201ENST00000264828 ABHD16BQ9H3Z7 469 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 PDP1Q9P0J1 537 aaPredicted RBP17.97■□□□□ 0.47
COL5A3-201ENST00000264828 HBS1LQ9Y450 684 aaKnown RBP17.97■□□□□ 0.47
COL5A3-201ENST00000264828 ZNF780BQ9Y6R6 833 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 ITPKAP23677 461 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 BCAP31P51572 246 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 PPP2R2BQ00005 443 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 HSF2Q03933 536 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 PEX6Q13608 980 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 PRAMEF19Q5SWL8 479 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 NEK5Q6P3R8 708 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 KIAA1324Q6UXG2 1013 aaKnown RBP17.97■□□□□ 0.47
COL5A3-201ENST00000264828 VGLL2Q8N8G2 317 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 PCDHGA3Q9Y5H0 932 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 LRRC10BA6NIK2 292 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 SERPINB7O75635 380 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 UGT2B17O75795 530 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 RPL3P39023 403 aaKnown RBP17.97■□□□□ 0.47
COL5A3-201ENST00000264828 RPS6KA3P51812 740 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 ANXA8L1Q5VT79 327 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 KBTBD7Q8WVZ9 684 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 MRPL45Q9BRJ2 306 aaKnown RBP17.97■□□□□ 0.47
COL5A3-201ENST00000264828 COPS4Q9BT78 406 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 MAGEL2Q9UJ55 1249 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 FBXO5Q9UKT4 447 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 CNOT6Q9ULM6 557 aaKnown RBP17.97■□□□□ 0.47
COL5A3-201ENST00000264828 RWDD3Q9Y3V2 267 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 RIC1Q4ADV7 1423 aa17.97■□□□□ 0.47
COL5A3-201ENST00000264828 CBFA2T3O75081 653 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms