RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 FUNDC2Q9BWH2 189 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 AS3MTQ9HBK9 375 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 IGSF5Q9NSI5 407 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 A0A087WZ62 844 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 C9JVG2 144 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 MGEA5O60502 916 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 GMNNO75496 209 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 MT-ND1P03886 318 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 PTPRAP18433 802 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 CAPN3P20807 821 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 NR4A1P22736 598 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 SLC6A2P23975 617 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 IFITM3Q01628 133 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 ADIGQ0VDE8 80 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 DNASE1L3Q13609 305 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 CBX2Q14781 532 aaPredicted RBP14.98□□□□□ -0.01
XRCC1-201ENST00000262887 PCID2Q5JVF3 399 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 ESRP1Q6NXG1 681 aaKnown RBP14.98□□□□□ -0.01
XRCC1-201ENST00000262887 TBPL2Q6SJ96 375 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 CYP2U1Q7Z449 544 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 TFAP2DQ7Z6R9 452 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 LINC00523Q86TU6 105 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 FKBP10Q96AY3 582 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 RPL10LQ96L21 214 aaKnown RBP14.98□□□□□ -0.01
XRCC1-201ENST00000262887 C3orf30Q96M34 536 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 GPR20Q99678 358 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 FDXACB1Q9BRP7 624 aaPredicted RBP14.98□□□□□ -0.01
XRCC1-201ENST00000262887 DNMT3BQ9UBC3 853 aaKnown RBP14.98□□□□□ -0.01
XRCC1-201ENST00000262887 MTRRQ9UBK8 725 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 ZNF639Q9UID6 485 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 ANAPC2Q9UJX6 822 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 POU2F3Q9UKI9 436 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 RLFQ13129 1914 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 FXYD1O00168 92 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 CPB1P15086 417 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 CHRM3P20309 590 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 SHMT2P34897 504 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 SOX11P35716 441 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 HNRNPFP52597 415 aaKnown RBP14.97□□□□□ -0.01
XRCC1-201ENST00000262887 YBX1P67809 324 aaKnown RBP14.97□□□□□ -0.01
XRCC1-201ENST00000262887 IGBP1P78318 339 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 LAMC2Q13753 1193 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 RBM48Q5RL73 367 aaKnown RBP14.97□□□□□ -0.01
XRCC1-201ENST00000262887 AGAP9Q5VTM2 703 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 BTBD8Q5XKL5 378 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 ZNF470Q6ECI4 717 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 VASH1Q7L8A9 365 aaPredicted RBP14.97□□□□□ -0.01
XRCC1-201ENST00000262887 UNC93AQ86WB7 457 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 SPARTQ8N0X7 666 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 ZBED3Q96IU2 234 aaPredicted RBP14.97□□□□□ -0.01
XRCC1-201ENST00000262887 SIAEQ9HAT2 523 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 ZNF277Q9NRM2 450 aaPredicted RBP14.97□□□□□ -0.01
XRCC1-201ENST00000262887 PIGVQ9NUD9 493 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 KLHL3Q9UH77 587 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 STAP1Q9ULZ2 295 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 H0Y858 1186 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 UBFD1O14562 309 aaKnown RBP14.97□□□□□ -0.01
XRCC1-201ENST00000262887 DAB1O75553 588 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 RSL1D1O76021 490 aaKnown RBP14.97□□□□□ -0.01
XRCC1-201ENST00000262887 SUPT7LO94864 414 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 JCHAINP01591 159 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 DNAJB2P25686 324 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 RPL34P49207 117 aaKnown RBP14.97□□□□□ -0.01
XRCC1-201ENST00000262887 GALNT1Q10472 559 aaPredicted RBP14.97□□□□□ -0.01
XRCC1-201ENST00000262887 SELENBP1Q13228 472 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 SKIV2LQ15477 1246 aaKnown RBP14.97□□□□□ -0.01
XRCC1-201ENST00000262887 INAVAQ3KP66 663 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 OTUD3Q5T2D3 398 aaPredicted RBP14.97□□□□□ -0.01
XRCC1-201ENST00000262887 R3HCC1LQ7Z5L2 792 aaKnown RBP14.97□□□□□ -0.01
XRCC1-201ENST00000262887 PAPD5Q8NDF8 572 aaKnown RBP14.97□□□□□ -0.01
XRCC1-201ENST00000262887 SLC2A14Q8TDB8 520 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 HDAC11Q96DB2 347 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 HSFY1Q96LI6 401 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 TEKT5Q96M29 485 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 AKTIPQ9H8T0 292 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 SPON1Q9HCB6 807 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 MYOZ2Q9NPC6 264 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 TLR9Q9NR96 1032 aa14.97□□□□□ -0.01
XRCC1-201ENST00000262887 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.97□□□□□ -0.01
XRCC1-201ENST00000262887 TCRBV5S2A0A599 114 aa14.96□□□□□ -0.01
XRCC1-201ENST00000262887 C16orf96A6NNT2 1141 aa14.96□□□□□ -0.01
XRCC1-201ENST00000262887 TGFB3P10600 412 aa14.96□□□□□ -0.01
XRCC1-201ENST00000262887 NCK1P16333 377 aa14.96□□□□□ -0.01
XRCC1-201ENST00000262887 CRHBPP24387 322 aa14.96□□□□□ -0.01
XRCC1-201ENST00000262887 TKTL1P51854 596 aa14.96□□□□□ -0.01
XRCC1-201ENST00000262887 TPTEP56180 551 aa14.96□□□□□ -0.01
XRCC1-201ENST00000262887 POU4F1Q01851 419 aa14.96□□□□□ -0.01
XRCC1-201ENST00000262887 TNFAIP1Q13829 316 aa14.96□□□□□ -0.01
XRCC1-201ENST00000262887 POLD3Q15054 466 aaPredicted RBP14.96□□□□□ -0.01
XRCC1-201ENST00000262887 SF3B4Q15427 424 aaKnown RBP eCLIP14.96□□□□□ -0.015e-9■■■■■ 41.1
XRCC1-201ENST00000262887 MAPRE1Q15691 268 aaKnown RBP14.96□□□□□ -0.01
XRCC1-201ENST00000262887 KYAT1Q16773 422 aa14.96□□□□□ -0.01
XRCC1-201ENST00000262887 FAM187BQ17R55 369 aa14.96□□□□□ -0.01
XRCC1-201ENST00000262887 SLC16A12Q6ZSM3 486 aa14.96□□□□□ -0.01
XRCC1-201ENST00000262887 DSG4Q86SJ6 1040 aa14.96□□□□□ -0.01
XRCC1-201ENST00000262887 SLCO6A1Q86UG4 719 aa14.96□□□□□ -0.01
XRCC1-201ENST00000262887 AGBL3Q8NEM8 1001 aa14.96□□□□□ -0.01
XRCC1-201ENST00000262887 ZFP90Q8TF47 636 aa14.96□□□□□ -0.01
XRCC1-201ENST00000262887 OSCP1Q8WVF1 389 aa14.96□□□□□ -0.01
XRCC1-201ENST00000262887 LRRC58Q96CX6 371 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms