RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 SHKBP1Q8TBC3 707 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 CALML6Q8TD86 181 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 MRPS31Q92665 395 aaKnown RBP13.59□□□□□ -0.23
VMP1-201ENST00000262291 CDKN2AIPNLQ96HQ2 116 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 MARK4Q96L34 752 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 ANKRD27Q96NW4 1050 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 OR52B2Q96RD2 323 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 TDRD1Q9BXT4 1180 aaKnown RBP13.59□□□□□ -0.23
VMP1-201ENST00000262291 POMKQ9H5K3 350 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 ALG9Q9H6U8 611 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 ZDHHC2Q9UIJ5 367 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 PCDHB9Q9Y5E1 797 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 LTBP2Q14767 1821 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 KIAA1671Q9BY89 1806 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 B2RBV5 119 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 TARM1B6A8C7 271 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 GYG2O15488 501 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 ATP6V1G1O75348 118 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 RPP40O75818 363 aaKnown RBP13.58□□□□□ -0.24
VMP1-201ENST00000262291 ATP5HO75947 161 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 CTSAP10619 480 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 DNAJB1P25685 340 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 FMO4P31512 558 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 HADHAP40939 763 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 KHDC1Q4VXA5 237 aaKnown RBP13.58□□□□□ -0.24
VMP1-201ENST00000262291 LIPMQ5VYY2 423 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 FBXO46Q6PJ61 603 aaPredicted RBP13.58□□□□□ -0.24
VMP1-201ENST00000262291 CHST9Q7L1S5 443 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 NECAB2Q7Z6G3 386 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 CAMK1DQ8IU85 385 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 KREMEN2Q8NCW0 462 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 OR4L1Q8NH43 312 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 DTX3LQ8TDB6 740 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 CLPTM1LQ96KA5 538 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 GBP5Q96PP8 586 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 NUF2Q9BZD4 464 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 SAR1AQ9NR31 198 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 TAS2R1Q9NYW7 299 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 FKBPLQ9UIM3 349 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 LNPEPQ9UIQ6 1025 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 APOBEC2Q9Y235 224 aaKnown RBP13.58□□□□□ -0.24
VMP1-201ENST00000262291 FAM50BQ9Y247 325 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 CAPN14A8MX76 684 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 KIAA0355O15063 1070 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 PAPSS2O95340 614 aaPredicted RBP13.58□□□□□ -0.24
VMP1-201ENST00000262291 IMPDH2P12268 514 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 TMC8Q8IU68 726 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 PHTF2Q8N3S3 785 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 RIN3Q8TB24 985 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 NRG4Q8WWG1 115 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 SLC46A2Q9BY10 475 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 CDH19Q9H159 772 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 CATSPERZQ9NTU4 200 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 POLR3BQ9NW08 1133 aaPredicted RBP13.58□□□□□ -0.24
VMP1-201ENST00000262291 LHX3Q9UBR4 397 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 CHD9Q3L8U1 2897 aa13.58□□□□□ -0.24
VMP1-201ENST00000262291 LOC100653049A0A140TA62 436 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 KRT34O76011 436 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 EPHA3P29320 983 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 CD70P32970 193 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 CTSOP43234 321 aaPredicted RBP13.57□□□□□ -0.24
VMP1-201ENST00000262291 CLCN5P51795 746 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 LBX1P52954 281 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 ACBD5Q5T8D3 534 aaPredicted RBP13.57□□□□□ -0.24
VMP1-201ENST00000262291 IRGCQ6NXR0 463 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 ITIH5Q86UX2 942 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 CMTM8Q8IZV2 173 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 LSMEM2Q8N112 164 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 HJURPQ8NCD3 748 aaPredicted RBP13.57□□□□□ -0.24
VMP1-201ENST00000262291 CEP295NLQ96MC4 621 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 CCDC106Q9BWC9 280 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 MRPL46Q9H2W6 279 aaKnown RBP13.57□□□□□ -0.24
VMP1-201ENST00000262291 TNFRSF12AQ9NP84 129 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 IL23AQ9NPF7 189 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 GALPQ9UBC7 116 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 HSFX1Q9UBD0 423 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 EVLQ9UI08 416 aaPredicted RBP13.57□□□□□ -0.24
VMP1-201ENST00000262291 ZNF232Q9UNY5 417 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 ANKRD12Q6UB98 2062 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 ZBTB14O43829 449 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 OR1I1O60431 355 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 MYOGP15173 224 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 TFEBP19484 476 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 STK19P49842 368 aaPredicted RBP13.57□□□□□ -0.24
VMP1-201ENST00000262291 NTHL1P78549 312 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 TIAL1Q01085 375 aaKnown RBP eCLIP13.57□□□□□ -0.244e-22■■■■■ 37
VMP1-201ENST00000262291 DYNC1I2Q13409 638 aaKnown RBP13.57□□□□□ -0.24
VMP1-201ENST00000262291 Q6ZNB5 142 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 KIAA0408Q6ZU52 694 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 PIANPQ8IYJ0 282 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 SCG3Q8WXD2 468 aaKnown RBP13.57□□□□□ -0.24
VMP1-201ENST00000262291 CCDC97Q96F63 343 aaPredicted RBP13.57□□□□□ -0.24
VMP1-201ENST00000262291 BTBD10Q9BSF8 475 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.57□□□□□ -0.24
VMP1-201ENST00000262291 UNC80Q8N2C7 3258 aa13.57□□□□□ -0.24
VMP1-201ENST00000262291 LRRC14BA6NHZ5 514 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 DCXO43602 365 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 FGBP02675 491 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 CTNNB1P35222 781 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 PPM1AP35813 382 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms