RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 HEPACAM2A8MVW5 462 aa22.33■■□□□ 1.17
SIX3-201ENST00000260653 HOXC11O43248 304 aaPredicted RBP22.33■■□□□ 1.17
SIX3-201ENST00000260653 SBK3P0C264 359 aa22.33■■□□□ 1.17
SIX3-201ENST00000260653 TROVE2P10155 538 aaKnown RBP eCLIP22.33■■□□□ 1.17
SIX3-201ENST00000260653 HNF1BP35680 557 aa22.33■■□□□ 1.17
SIX3-201ENST00000260653 STX3Q13277 289 aa22.33■■□□□ 1.17
SIX3-201ENST00000260653 FSTL5Q8N475 847 aaPredicted RBP22.33■■□□□ 1.17
SIX3-201ENST00000260653 RFWD2Q8NHY2 731 aa22.33■■□□□ 1.17
SIX3-201ENST00000260653 CCT6BQ92526 530 aa22.33■■□□□ 1.17
SIX3-201ENST00000260653 SCYL1Q96KG9 808 aa22.33■■□□□ 1.17
SIX3-201ENST00000260653 MRGPRX3Q96LB0 322 aa22.33■■□□□ 1.17
SIX3-201ENST00000260653 C7orf26Q96N11 449 aa22.33■■□□□ 1.17
SIX3-201ENST00000260653 TUBGCP5Q96RT8 1024 aa22.33■■□□□ 1.17
SIX3-201ENST00000260653 CIPCQ9C0C6 399 aa22.33■■□□□ 1.17
SIX3-201ENST00000260653 GPAMQ9HCL2 828 aa22.33■■□□□ 1.17
SIX3-201ENST00000260653 DCTN4Q9UJW0 460 aa22.33■■□□□ 1.17
SIX3-201ENST00000260653 ATXN2Q99700 1313 aaKnown RBP22.33■■□□□ 1.17
SIX3-201ENST00000260653 A0A087X1B8 175 aa22.33■■□□□ 1.17
SIX3-201ENST00000260653 C1orf232A0A0U1RR37 186 aa22.33■■□□□ 1.17
SIX3-201ENST00000260653 CCT8L1PA6NM43 557 aa22.33■■□□□ 1.17
SIX3-201ENST00000260653 GPR39O43194 453 aa22.33■■□□□ 1.17
SIX3-201ENST00000260653 KLHL2O95198 593 aa22.33■■□□□ 1.17
SIX3-201ENST00000260653 CISD3P0C7P0 127 aa22.33■■□□□ 1.17
SIX3-201ENST00000260653 MESP2Q0VG99 397 aa22.33■■□□□ 1.17
SIX3-201ENST00000260653 LRRC8EQ6NSJ5 796 aa22.33■■□□□ 1.17
SIX3-201ENST00000260653 EP400NLQ6ZTU2 488 aa22.33■■□□□ 1.17
SIX3-201ENST00000260653 TRPM8Q7Z2W7 1104 aa22.33■■□□□ 1.17
SIX3-201ENST00000260653 YTHDF3Q7Z739 585 aaKnown RBP22.33■■□□□ 1.17
SIX3-201ENST00000260653 LCA5Q86VQ0 697 aa22.33■■□□□ 1.17
SIX3-201ENST00000260653 TSPAN17Q96FV3 270 aa22.33■■□□□ 1.17
SIX3-201ENST00000260653 A8MX80 341 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 H7C0S8 307 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 HGSO14964 777 aaPredicted RBP22.32■■□□□ 1.16
SIX3-201ENST00000260653 ITGA9Q13797 1035 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 CSHL1Q14406 222 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 SPRED3Q2MJR0 410 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 FAM45BPQ6NSW5 357 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 CCDC121Q6ZUS5 278 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 TBC1D1Q86TI0 1168 aaPredicted RBP22.32■■□□□ 1.16
SIX3-201ENST00000260653 OR2A12Q8NGT7 310 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 TTC8Q8TAM2 541 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 FAM45AQ8TCE6 357 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 TIFAQ96CG3 184 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 SUV39H2Q9H5I1 410 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 ZFYVE1Q9HBF4 777 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 INTS10Q9NVR2 710 aaKnown RBP22.32■■□□□ 1.16
SIX3-201ENST00000260653 GDE1Q9NZC3 331 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 UBA6A0AVT1 1052 aaPredicted RBP22.32■■□□□ 1.16
SIX3-201ENST00000260653 CAPN8A6NHC0 703 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 TTC34A8MYJ7 566 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 TULP3O75386 442 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 POP4O95707 220 aaKnown RBP22.32■■□□□ 1.16
SIX3-201ENST00000260653 UGT2B4P06133 528 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 FCARP24071 287 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 SEMG2Q02383 582 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 ZRANB3Q5FWF4 1079 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 COL13A1Q5TAT6 717 aaPredicted RBP22.32■■□□□ 1.16
SIX3-201ENST00000260653 KIAA1958Q8N8K9 716 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 GRIN3AQ8TCU5 1115 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 HEXDCQ8WVB3 486 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 LPGAT1Q92604 370 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 ECHDC3Q96DC8 303 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 TRIM55Q9BYV6 548 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 CPEB1Q9BZB8 566 aaKnown RBP22.32■■□□□ 1.16
SIX3-201ENST00000260653 IGSF5Q9NSI5 407 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 XPR1Q9UBH6 696 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 SCN8AQ9UQD0 1980 aa22.32■■□□□ 1.16
SIX3-201ENST00000260653 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.31■■□□□ 1.16
SIX3-201ENST00000260653 ITM2AO43736 263 aa22.31■■□□□ 1.16
SIX3-201ENST00000260653 LYPLA1O75608 230 aaPredicted RBP22.31■■□□□ 1.16
SIX3-201ENST00000260653 CLDN7O95471 211 aa22.31■■□□□ 1.16
SIX3-201ENST00000260653 RALBP11234 206 aa22.31■■□□□ 1.16
SIX3-201ENST00000260653 XIAPP98170 497 aa22.31■■□□□ 1.16
SIX3-201ENST00000260653 TIAL1Q01085 375 aaKnown RBP eCLIP22.31■■□□□ 1.16
SIX3-201ENST00000260653 CDKN3Q16667 212 aa22.31■■□□□ 1.16
SIX3-201ENST00000260653 TMEM207Q6UWW9 146 aa22.31■■□□□ 1.16
SIX3-201ENST00000260653 FRS2Q8WU20 508 aa22.31■■□□□ 1.16
SIX3-201ENST00000260653 ANKRD49Q8WVL7 239 aa22.31■■□□□ 1.16
SIX3-201ENST00000260653 NSUN3Q9H649 340 aaKnown RBP22.31■■□□□ 1.16
SIX3-201ENST00000260653 NPIPB15A6NHN6 443 aaPredicted RBP22.31■■□□□ 1.16
SIX3-201ENST00000260653 SERPINE1P05121 402 aa22.31■■□□□ 1.16
SIX3-201ENST00000260653 FDXRP22570 491 aa22.31■■□□□ 1.16
SIX3-201ENST00000260653 ANKRD54Q6NXT1 300 aa22.31■■□□□ 1.16
SIX3-201ENST00000260653 TMEM184AQ6ZMB5 413 aa22.31■■□□□ 1.16
SIX3-201ENST00000260653 TSPAN33Q86UF1 283 aa22.31■■□□□ 1.16
SIX3-201ENST00000260653 FAM136AQ96C01 138 aa22.31■■□□□ 1.16
SIX3-201ENST00000260653 THAP1Q9NVV9 213 aa22.31■■□□□ 1.16
SIX3-201ENST00000260653 CORO1CQ9ULV4 474 aaPredicted RBP22.31■■□□□ 1.16
SIX3-201ENST00000260653 RRP15Q9Y3B9 282 aaKnown RBP22.31■■□□□ 1.16
SIX3-201ENST00000260653 TGDSO95455 350 aa22.3■■□□□ 1.16
SIX3-201ENST00000260653 NFATC1O95644 943 aa22.3■■□□□ 1.16
SIX3-201ENST00000260653 APOA4P06727 396 aa22.3■■□□□ 1.16
SIX3-201ENST00000260653 CCDC166P0CW27 439 aa22.3■■□□□ 1.16
SIX3-201ENST00000260653 GAB4Q2WGN9 574 aa22.3■■□□□ 1.16
SIX3-201ENST00000260653 TANGO2Q6ICL3 276 aa22.3■■□□□ 1.16
SIX3-201ENST00000260653 ETFBKMTQ8IXQ9 262 aa22.3■■□□□ 1.16
SIX3-201ENST00000260653 MTG2Q9H4K7 406 aa22.3■■□□□ 1.16
SIX3-201ENST00000260653 SPTBN5Q9NRC6 3674 aaKnown RBP22.3■■□□□ 1.16
SIX3-201ENST00000260653 A0A0G2JND7 137 aa22.3■■□□□ 1.16
SIX3-201ENST00000260653 TARM1B6A8C7 271 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms