RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 SPO11Q9Y5K1 396 aa12.12□□□□□ -0.47
NIP7-201ENST00000254940 SNX3O60493 162 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 POP4O95707 220 aaKnown RBP12.11□□□□□ -0.47
NIP7-201ENST00000254940 PRLP01236 227 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 PGAM1P18669 254 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 LIG3P49916 1009 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 IL9RQ01113 521 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 MGAT5Q09328 741 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 CNTN1Q12860 1018 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 SEPT6Q14141 434 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 PRPSAP1Q14558 356 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 SIRPB2Q5JXA9 342 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 HHATQ5VTY9 493 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 RFLNAQ6ZTI6 216 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 TTC7BQ86TV6 843 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 TSPAN33Q86UF1 283 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 C10orf67Q8IYJ2 551 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 CCDC63Q8NA47 563 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 MAGEB18Q96M61 343 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 TBL1YQ9BQ87 522 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 FRMD8Q9BZ67 464 aaPredicted RBP12.11□□□□□ -0.47
NIP7-201ENST00000254940 OSBPL6Q9BZF3 934 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 UNKQ9C0B0 810 aaKnown RBP12.11□□□□□ -0.47
NIP7-201ENST00000254940 ATP13A3Q9H7F0 1226 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 CASS4Q9NQ75 786 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 EIF2B3Q9NR50 452 aaKnown RBP12.11□□□□□ -0.47
NIP7-201ENST00000254940 ABCF3Q9NUQ8 709 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 SPATA6Q9NWH7 488 aaPredicted RBP12.11□□□□□ -0.47
NIP7-201ENST00000254940 SAMD15Q9P1V8 674 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 MMP17Q9ULZ9 603 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 COQ6Q9Y2Z9 468 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 MYO1CO00159 1063 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 GSRP00390 522 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 PRSS56P0CW18 603 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 MLNP12872 115 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 GABRG2P18507 467 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 CDK16Q00536 496 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 ELAVL3Q14576 367 aaKnown RBP12.11□□□□□ -0.47
NIP7-201ENST00000254940 FAM219BQ5XKK7 198 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 LDB1Q86U70 411 aaPredicted RBP12.11□□□□□ -0.47
NIP7-201ENST00000254940 RASSF3Q86WH2 238 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 SUGP1Q8IWZ8 645 aaKnown RBP12.11□□□□□ -0.47
NIP7-201ENST00000254940 NDUFAF2Q8N183 169 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 TMEM105Q8N8V8 129 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 ARMC2Q8NEN0 867 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 MDGA1Q8NFP4 955 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 MOCOSQ96EN8 888 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 CERS2Q96G23 380 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 SGSM3Q96HU1 749 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 RMDN2Q96LZ7 410 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 VAT1Q99536 393 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 GABRG3Q99928 467 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 MYOCQ99972 504 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 TDRD1Q9BXT4 1180 aaKnown RBP12.11□□□□□ -0.47
NIP7-201ENST00000254940 PITPNM3Q9BZ71 974 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 CEP44Q9C0F1 390 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 SUV39H2Q9H5I1 410 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 BPIFA1Q9NP55 256 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 ACSS2Q9NR19 701 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 BFARQ9NZS9 450 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 ZFATQ9P243 1243 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 FETUBQ9UGM5 382 aa12.11□□□□□ -0.47
NIP7-201ENST00000254940 OR51F1A6NGY5 319 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 C16orf96A6NNT2 1141 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 SPAG6O75602 509 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 ALDH1A2O94788 518 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 SUN1O94901 812 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 POLBP06746 335 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 SNRPAP09012 282 aaKnown RBP12.1□□□□□ -0.47
NIP7-201ENST00000254940 SAT1P21673 171 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 SERPINA4P29622 427 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 RPS14P62263 151 aaKnown RBP12.1□□□□□ -0.47
NIP7-201ENST00000254940 MRPS21P82921 87 aaKnown RBP12.1□□□□□ -0.47
NIP7-201ENST00000254940 ZNF33AQ06730 810 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 CDK18Q07002 472 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 LRRC32Q14392 662 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 RASA2Q15283 850 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 CST6Q15828 149 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 ANKRD20A4Q4UJ75 823 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 ESRP1Q6NXG1 681 aaKnown RBP12.1□□□□□ -0.47
NIP7-201ENST00000254940 PACS1Q6VY07 963 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 HDDC3Q8N4P3 179 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 MRGPRX1Q96LB2 322 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 SUN2Q9UH99 717 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 PPM1HQ9ULR3 514 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 PHTF1Q9UMS5 762 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 CYP8B1Q9UNU6 501 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 SMG5Q9UPR3 1016 aaKnown RBP12.1□□□□□ -0.47
NIP7-201ENST00000254940 TPP1O14773 563 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 BGNP21810 368 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 MAT2AP31153 395 aaKnown RBP12.1□□□□□ -0.47
NIP7-201ENST00000254940 ADRA1AP35348 466 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 ETV4P43268 484 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 DGKEP52429 567 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 GEMP55040 296 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 SRSF5Q13243 272 aaKnown RBP12.1□□□□□ -0.47
NIP7-201ENST00000254940 CAMK2GQ13555 558 aaPredicted RBP12.1□□□□□ -0.47
NIP7-201ENST00000254940 SEPT7Q16181 437 aaKnown RBP12.1□□□□□ -0.47
NIP7-201ENST00000254940 FBXO43Q4G163 708 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 ARMC12Q5T9G4 340 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms