RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 GRIA3P42263 894 aa25.53■■□□□ 1.68
RAB40C-201ENST00000248139 CDKN1CP49918 316 aaPredicted RBP25.53■■□□□ 1.68
RAB40C-201ENST00000248139 HERVK_113P63132 956 aa25.53■■□□□ 1.68
RAB40C-201ENST00000248139 RHDQ02161 417 aa25.53■■□□□ 1.68
RAB40C-201ENST00000248139 VARS2Q5ST30 1063 aaKnown RBP25.53■■□□□ 1.68
RAB40C-201ENST00000248139 PAXIP1Q6ZW49 1069 aaPredicted RBP25.53■■□□□ 1.68
RAB40C-201ENST00000248139 DIS3LQ8TF46 1054 aaKnown RBP25.53■■□□□ 1.68
RAB40C-201ENST00000248139 SOCS4Q8WXH5 440 aa25.53■■□□□ 1.68
RAB40C-201ENST00000248139 ERVK-6Q9BXR3 956 aa25.53■■□□□ 1.68
RAB40C-201ENST00000248139 CD300AQ9UGN4 299 aa25.53■■□□□ 1.68
RAB40C-201ENST00000248139 TIMM22Q9Y584 194 aa25.53■■□□□ 1.68
RAB40C-201ENST00000248139 TPST1O60507 370 aa25.53■■□□□ 1.68
RAB40C-201ENST00000248139 KPNA6O60684 536 aa25.53■■□□□ 1.68
RAB40C-201ENST00000248139 MTHFD2P13995 350 aa25.53■■□□□ 1.68
RAB40C-201ENST00000248139 CCND3P30281 292 aaPredicted RBP25.53■■□□□ 1.68
RAB40C-201ENST00000248139 APLP1P51693 650 aa25.53■■□□□ 1.68
RAB40C-201ENST00000248139 INHBCP55103 352 aa25.53■■□□□ 1.68
RAB40C-201ENST00000248139 TTC16Q8NEE8 873 aa25.53■■□□□ 1.68
RAB40C-201ENST00000248139 ZNF512Q96ME7 567 aaPredicted RBP25.53■■□□□ 1.68
RAB40C-201ENST00000248139 TUBB1Q9H4B7 451 aa25.53■■□□□ 1.68
RAB40C-201ENST00000248139 SEMA4BQ9NPR2 832 aaPredicted RBP25.53■■□□□ 1.68
RAB40C-201ENST00000248139 A0A0J9YYE9 177 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 SRP72O76094 671 aaKnown RBP25.52■■□□□ 1.68
RAB40C-201ENST00000248139 PAPSS2O95340 614 aaPredicted RBP25.52■■□□□ 1.68
RAB40C-201ENST00000248139 GFAPP14136 432 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 GPX3P22352 226 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 FMO4P31512 558 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 NRG1Q02297 640 aaPredicted RBP25.52■■□□□ 1.68
RAB40C-201ENST00000248139 MYLK3Q32MK0 819 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 GLB1LQ6UWU2 654 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 TEX26Q8N6G2 289 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 DCBLD1Q8N8Z6 715 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 PATJQ8NI35 1801 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 CANT1Q8WVQ1 401 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 NCSTNQ92542 709 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 SEPT5Q99719 369 aaPredicted RBP25.52■■□□□ 1.68
RAB40C-201ENST00000248139 SLC25A23Q9BV35 468 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 OCEL1Q9H607 264 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 MAP10Q9P2G4 905 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 GALPQ9UBC7 116 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 RNF11Q9Y3C5 154 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 FAM149AA5PLN7 773 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 PLOD2O00469 737 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 KIF3CO14782 793 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 ATP6V1B2P21281 511 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 CES1P23141 567 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 PBX3P40426 434 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 SERINC3Q13530 473 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 AP1ARQ63HQ0 302 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 NADSYN1Q6IA69 706 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 OR7D4Q8NG98 312 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 TWIST2Q8WVJ9 160 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 STON2Q8WXE9 905 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 TMEM181Q9P2C4 612 aa25.52■■□□□ 1.68
RAB40C-201ENST00000248139 ADAMTS4O75173 837 aa25.51■■□□□ 1.67
RAB40C-201ENST00000248139 FAM58BPP0C7Q3 252 aa25.51■■□□□ 1.67
RAB40C-201ENST00000248139 FDXRP22570 491 aa25.51■■□□□ 1.67
RAB40C-201ENST00000248139 ZNF235Q14590 738 aa25.51■■□□□ 1.67
RAB40C-201ENST00000248139 RBBP5Q15291 538 aaKnown RBP25.51■■□□□ 1.67
RAB40C-201ENST00000248139 MAPRE2Q15555 327 aa25.51■■□□□ 1.67
RAB40C-201ENST00000248139 ARMC3Q5W041 872 aa25.51■■□□□ 1.67
RAB40C-201ENST00000248139 FAM45BPQ6NSW5 357 aa25.51■■□□□ 1.67
RAB40C-201ENST00000248139 IFNL1Q8IU54 200 aa25.51■■□□□ 1.67
RAB40C-201ENST00000248139 ATP6V0D2Q8N8Y2 350 aa25.51■■□□□ 1.67
RAB40C-201ENST00000248139 FAM45AQ8TCE6 357 aa25.51■■□□□ 1.67
RAB40C-201ENST00000248139 GIPC2Q8TF65 315 aa25.51■■□□□ 1.67
RAB40C-201ENST00000248139 BTN2A3PQ96KV6 586 aa25.51■■□□□ 1.67
RAB40C-201ENST00000248139 UROC1Q96N76 676 aa25.51■■□□□ 1.67
RAB40C-201ENST00000248139 C8BP07358 591 aa25.51■■□□□ 1.67
RAB40C-201ENST00000248139 ZNF37AP17032 561 aaPredicted RBP25.51■■□□□ 1.67
RAB40C-201ENST00000248139 CAPN3P20807 821 aa25.51■■□□□ 1.67
RAB40C-201ENST00000248139 PRDX3P30048 256 aaKnown RBP25.51■■□□□ 1.67
RAB40C-201ENST00000248139 RPL5P46777 297 aaKnown RBP25.51■■□□□ 1.67
RAB40C-201ENST00000248139 RGRP47804 291 aa25.51■■□□□ 1.67
RAB40C-201ENST00000248139 FLT3LGP49771 235 aa25.51■■□□□ 1.67
RAB40C-201ENST00000248139 CTXN3Q4LDR2 81 aa25.51■■□□□ 1.67
RAB40C-201ENST00000248139 PAQR3Q6TCH7 311 aa25.51■■□□□ 1.67
RAB40C-201ENST00000248139 CLYBLQ8N0X4 340 aa25.51■■□□□ 1.67
RAB40C-201ENST00000248139 CATSPER1Q8NEC5 780 aa25.51■■□□□ 1.67
RAB40C-201ENST00000248139 L3HYPDHQ96EM0 354 aa25.51■■□□□ 1.67
RAB40C-201ENST00000248139 MPP4Q96JB8 637 aa25.51■■□□□ 1.67
RAB40C-201ENST00000248139 TSR3Q9UJK0 312 aaKnown RBP25.51■■□□□ 1.67
RAB40C-201ENST00000248139 CNOT6Q9ULM6 557 aaKnown RBP25.51■■□□□ 1.67
RAB40C-201ENST00000248139 AURKCQ9UQB9 309 aa25.51■■□□□ 1.67
RAB40C-201ENST00000248139 SPO11Q9Y5K1 396 aa25.51■■□□□ 1.67
RAB40C-201ENST00000248139 STX1BP61266 288 aa25.5■■□□□ 1.67
RAB40C-201ENST00000248139 IKBKEQ14164 716 aa25.5■■□□□ 1.67
RAB40C-201ENST00000248139 ZFP28Q8NHY6 868 aa25.5■■□□□ 1.67
RAB40C-201ENST00000248139 TUBGCP3Q96CW5 907 aa25.5■■□□□ 1.67
RAB40C-201ENST00000248139 SPON2Q9BUD6 331 aa25.5■■□□□ 1.67
RAB40C-201ENST00000248139 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.5■■□□□ 1.67
RAB40C-201ENST00000248139 NME4O00746 187 aa25.5■■□□□ 1.67
RAB40C-201ENST00000248139 DIO3P55073 304 aa25.5■■□□□ 1.67
RAB40C-201ENST00000248139 RPL26P61254 145 aaKnown RBP25.5■■□□□ 1.67
RAB40C-201ENST00000248139 FAM171A1Q5VUB5 890 aa25.5■■□□□ 1.67
RAB40C-201ENST00000248139 DCP1BQ8IZD4 617 aaKnown RBP25.5■■□□□ 1.67
RAB40C-201ENST00000248139 ZIC5Q96T25 663 aa25.5■■□□□ 1.67
RAB40C-201ENST00000248139 POLR1EQ9GZS1 481 aaKnown RBP25.5■■□□□ 1.67
RAB40C-201ENST00000248139 FBXO44Q9H4M3 255 aa25.5■■□□□ 1.67
RAB40C-201ENST00000248139 SARDHQ9UL12 918 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms