RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 FEM1CQ96JP0 617 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 ALPK1Q96QP1 1244 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 POP1Q99575 1024 aaKnown RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 PIP5K1AQ99755 562 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 SLC29A1Q99808 456 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 ZSWIM1Q9BR11 485 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 NUDT16L1Q9BRJ7 211 aaKnown RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 KLHL25Q9H0H3 589 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 PCIF1Q9H4Z3 704 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 NSUN3Q9H649 340 aaKnown RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 CSNK1G1Q9HCP0 422 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 TBC1D23Q9NUY8 699 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 NSMCE4AQ9NXX6 385 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 CPNE7Q9UBL6 633 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 CYP8B1Q9UNU6 501 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 GINS2Q9Y248 185 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 PCDHB4Q9Y5E5 795 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 A6NLC8 198 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 RTCAO00442 366 aaKnown RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 RGS13O14921 159 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 ZNF263O14978 683 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 MUSKO15146 869 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 B3GALT2O43825 422 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 SIN3BO75182 1162 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 XYLBO75191 536 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 CLPTM1O96005 669 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 PRLP01236 227 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 EIF2S1P05198 315 aaKnown RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 CAPN1P07384 714 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 ZNF12P17014 697 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 FMO5P49326 533 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 RASSF2P50749 326 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 DNA2P51530 1060 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 HNRNPFP52597 415 aaKnown RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 YARSP54577 528 aaKnown RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 ARL4CP56559 192 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 POU6F2P78424 691 aaPredicted RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 FOLH1Q04609 750 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 ELAVL2Q12926 359 aaKnown RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 GPM6BQ13491 265 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 HNRNPDQ14103 355 aaKnown RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 SCARB2Q14108 478 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 PDK3Q15120 406 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 LRRC36Q1X8D7 754 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 LEXMQ3ZCV2 418 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 SV2CQ496J9 727 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 SFT2D3Q587I9 215 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 TCP11X2Q5H9J9 407 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 GLRA4Q5JXX5 417 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 PRSS36Q5K4E3 855 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 SPDYAQ5MJ70 313 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 DENND2CQ68D51 928 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 METTL2BQ6P1Q9 378 aaKnown RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 SYCE2Q6PIF2 218 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 UTS2BQ765I0 119 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 TMC3Q7Z5M5 1100 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 KCTD20Q7Z5Y7 419 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 ERI1Q8IV48 349 aaKnown RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 KLHL7Q8IXQ5 586 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 CRYBG2Q8N1P7 616 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 SCML4Q8N228 414 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 TMEM86AQ8N2M4 240 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 CFAP61Q8NHU2 1237 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 C2orf15Q8WU43 125 aaKnown RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 DACT3Q96B18 629 aaPredicted RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 PABPC5Q96DU9 382 aaKnown RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 TMA16Q96EY4 203 aaKnown RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 ERGIC2Q96RQ1 377 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 PI4K2AQ9BTU6 479 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 MRPL1Q9BYD6 325 aaKnown RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 SLC2A11Q9BYW1 496 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 UNKQ9C0B0 810 aaKnown RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 PAIP1Q9H074 479 aaKnown RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 ISCUQ9H1K1 167 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 CRISPLD1Q9H336 500 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 TLE6Q9H808 572 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 MMRN2Q9H8L6 949 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 SP140LQ9H930 580 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 ZFYVE1Q9HBF4 777 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.67□□□□□ -1.82
UFM1-201ENST00000239878 TMEM30AQ9NV96 361 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 FETUBQ9UGM5 382 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 AP3M1Q9Y2T2 418 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 CORINQ9Y5Q5 1042 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 MYH10P35580 1976 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 A0A087X0M5 115 aa3.66□□□□□ -1.82
UFM1-201ENST00000239878 C15orf38-AP3S2A0A0A6YYH1 394 aa3.66□□□□□ -1.82
UFM1-201ENST00000239878 A0A1B0GX30 115 aa3.66□□□□□ -1.82
UFM1-201ENST00000239878 PRR23AA6NEV1 266 aa3.66□□□□□ -1.82
UFM1-201ENST00000239878 CASTOR2A6NHX0 329 aa3.66□□□□□ -1.82
UFM1-201ENST00000239878 OR6C75A6NL08 312 aa3.66□□□□□ -1.82
UFM1-201ENST00000239878 SYCE1LA8MT33 242 aa3.66□□□□□ -1.82
UFM1-201ENST00000239878 FOXO6A8MYZ6 492 aa3.66□□□□□ -1.82
UFM1-201ENST00000239878 B8ZZF3 427 aa3.66□□□□□ -1.82
UFM1-201ENST00000239878 H7C0S8 307 aa3.66□□□□□ -1.82
UFM1-201ENST00000239878 J3QRK9 145 aa3.66□□□□□ -1.82
UFM1-201ENST00000239878 NDC80O14777 642 aa3.66□□□□□ -1.82
UFM1-201ENST00000239878 XPO1O14980 1071 aaKnown RBP3.66□□□□□ -1.82
UFM1-201ENST00000239878 EXOC3O60645 756 aa3.66□□□□□ -1.82
UFM1-201ENST00000239878 NDUFS2O75306 463 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms