RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 PYGBP11216 843 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 CHRM1P11229 460 aaPredicted RBP13.22□□□□□ -0.29
SLIRP-201ENST00000238688 PABPC1P11940 636 aaKnown RBP13.22□□□□□ -0.29
SLIRP-201ENST00000238688 TPH1P17752 444 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 TYK2P29597 1187 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 SERPINA4P29622 427 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 NNMTP40261 264 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 ID4P47928 161 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 LEPRP48357 1165 aaKnown RBP13.22□□□□□ -0.29
SLIRP-201ENST00000238688 CD151P48509 253 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 PRKAA2P54646 552 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 WDR4P57081 412 aaKnown RBP13.22□□□□□ -0.29
SLIRP-201ENST00000238688 DMTNQ08495 405 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 SEPT6Q14141 434 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 MPP2Q14168 576 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 EIF4HQ15056 248 aaKnown RBP13.22□□□□□ -0.29
SLIRP-201ENST00000238688 ZSCAN26Q16670 478 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 TAF1BQ53T94 588 aaPredicted RBP13.22□□□□□ -0.29
SLIRP-201ENST00000238688 PITRM1Q5JRX3 1037 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 AARS2Q5JTZ9 985 aaKnown RBP13.22□□□□□ -0.29
SLIRP-201ENST00000238688 ARMC12Q5T9G4 340 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 MROH9Q5TGP6 573 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 ZDHHC20Q5W0Z9 365 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 LVRNQ6Q4G3 990 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 AFTPHQ6ULP2 937 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 ZC3HC1Q86WB0 502 aaKnown RBP13.22□□□□□ -0.29
SLIRP-201ENST00000238688 ANKRD42Q8N9B4 389 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 OR2AP1Q8NGE2 309 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 RDH11Q8TC12 318 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 TCP10LQ8TDR4 215 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 LRRC8CQ8TDW0 803 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 ZBTB9Q96C00 473 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 MRRFQ96E11 262 aaKnown RBP13.22□□□□□ -0.29
SLIRP-201ENST00000238688 LRIG1Q96JA1 1093 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 SERAC1Q96JX3 654 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 ZNF641Q96N77 438 aaPredicted RBP13.22□□□□□ -0.29
SLIRP-201ENST00000238688 TSNARE1Q96NA8 513 aa13.22□□□□□ -0.29
SLIRP-201ENST00000238688 INTS10Q9NVR2 710 aaKnown RBP13.22□□□□□ -0.29
SLIRP-201ENST00000238688 NLE1Q9NVX2 485 aaPredicted RBP13.22□□□□□ -0.29
SLIRP-201ENST00000238688 GON4LQ3T8J9 2241 aa13.21□□□□□ -0.29
SLIRP-201ENST00000238688 H2AFYO75367 372 aaKnown RBP13.21□□□□□ -0.29
SLIRP-201ENST00000238688 ALDOAP04075 364 aaKnown RBP13.21□□□□□ -0.29
SLIRP-201ENST00000238688 SRPRAP08240 638 aaKnown RBP13.21□□□□□ -0.29
SLIRP-201ENST00000238688 TYRP14679 529 aa13.21□□□□□ -0.29
SLIRP-201ENST00000238688 CREB1P16220 341 aa13.21□□□□□ -0.29
SLIRP-201ENST00000238688 CD9P21926 228 aa13.21□□□□□ -0.29
SLIRP-201ENST00000238688 LPOP22079 712 aaPredicted RBP13.21□□□□□ -0.29
SLIRP-201ENST00000238688 ARNTP27540 789 aa13.21□□□□□ -0.29
SLIRP-201ENST00000238688 PPARGP37231 505 aaPredicted RBP13.21□□□□□ -0.29
SLIRP-201ENST00000238688 OPRD1P41143 372 aa13.21□□□□□ -0.29
SLIRP-201ENST00000238688 CSRP3P50461 194 aa13.21□□□□□ -0.29
SLIRP-201ENST00000238688 OLIG2Q13516 323 aa13.21□□□□□ -0.29
SLIRP-201ENST00000238688 CNGA3Q16281 694 aa13.21□□□□□ -0.29
SLIRP-201ENST00000238688 LPAL2Q16609 132 aa13.21□□□□□ -0.29
SLIRP-201ENST00000238688 TSNAXIP1Q2TAA8 658 aa13.21□□□□□ -0.29
SLIRP-201ENST00000238688 ATG16L1Q676U5 607 aa13.21□□□□□ -0.29
SLIRP-201ENST00000238688 ESRP1Q6NXG1 681 aaKnown RBP13.21□□□□□ -0.29
SLIRP-201ENST00000238688 SDCCAG8Q86SQ7 713 aaPredicted RBP13.21□□□□□ -0.29
SLIRP-201ENST00000238688 TAX1BP1Q86VP1 789 aa13.21□□□□□ -0.29
SLIRP-201ENST00000238688 RAVER1Q8IY67 606 aaKnown RBP13.21□□□□□ -0.29
SLIRP-201ENST00000238688 ADGRG2Q8IZP9 1017 aa13.21□□□□□ -0.29
SLIRP-201ENST00000238688 SLC25A41Q8N5S1 370 aa13.21□□□□□ -0.29
SLIRP-201ENST00000238688 OR13J1Q8NGT2 312 aa13.21□□□□□ -0.29
SLIRP-201ENST00000238688 ZNF398Q8TD17 642 aa13.21□□□□□ -0.29
SLIRP-201ENST00000238688 HCAR2Q8TDS4 363 aa13.21□□□□□ -0.29
SLIRP-201ENST00000238688 LYSMD1Q96S90 227 aa13.21□□□□□ -0.29
SLIRP-201ENST00000238688 P2RY13Q9BPV8 354 aa13.21□□□□□ -0.29
SLIRP-201ENST00000238688 POPDC3Q9HBV1 291 aa13.21□□□□□ -0.29
SLIRP-201ENST00000238688 IARS2Q9NSE4 1012 aaKnown RBP13.21□□□□□ -0.29
SLIRP-201ENST00000238688 PIH1D1Q9NWS0 290 aaKnown RBP13.21□□□□□ -0.29
SLIRP-201ENST00000238688 FBXO5Q9UKT4 447 aa13.21□□□□□ -0.29
SLIRP-201ENST00000238688 COMMD10Q9Y6G5 202 aa13.21□□□□□ -0.29
SLIRP-201ENST00000238688 CNOT1A5YKK6 2376 aaKnown RBP13.21□□□□□ -0.3
SLIRP-201ENST00000238688 A0A087X1B8 175 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 WASH3PC4AMC7 463 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 SCAMP3O14828 347 aaKnown RBP13.2□□□□□ -0.3
SLIRP-201ENST00000238688 SNAP91O60641 907 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 SPAG7O75391 227 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 PGLSO95336 258 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 POP4O95707 220 aaKnown RBP13.2□□□□□ -0.3
SLIRP-201ENST00000238688 PRLP01236 227 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 ATP5BP06576 529 aaKnown RBP13.2□□□□□ -0.3
SLIRP-201ENST00000238688 VIMP08670 466 aaKnown RBP13.2□□□□□ -0.3
SLIRP-201ENST00000238688 DRD1P21728 446 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 DRD4P21917 467 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 GLDCP23378 1020 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 HLA-FP30511 346 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 CHRNA4P43681 627 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 ZNF140P52738 457 aaPredicted RBP13.2□□□□□ -0.3
SLIRP-201ENST00000238688 ECT2LQ008S8 904 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 BCL2L1Q07817 233 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 MESP2Q0VG99 397 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 GRSF1Q12849 480 aaKnown RBP eCLIP13.2□□□□□ -0.3
SLIRP-201ENST00000238688 ITIH4Q14624 930 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 ZNF470Q6ECI4 717 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 TPGS1Q6ZTW0 290 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 GLT6D1Q7Z4J2 308 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 YTHDF3Q7Z739 585 aaKnown RBP13.2□□□□□ -0.3
SLIRP-201ENST00000238688 WDR5BQ86VZ2 330 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 LONP2Q86WA8 852 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms