RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 PMLP29590 882 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 ALDH7A1P49419 539 aaKnown RBP16.16■□□□□ 0.18
UBE3D-201ENST00000237186 THOP1P52888 689 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 ZNF177Q13360 481 aaPredicted RBP16.16■□□□□ 0.18
UBE3D-201ENST00000237186 CEACAM7Q14002 265 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 ADGRF1Q5T601 910 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 CAPRIN2Q6IMN6 1127 aaKnown RBP16.16■□□□□ 0.18
UBE3D-201ENST00000237186 AFTPHQ6ULP2 937 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 HMGCLL1Q8TB92 370 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 UCMAQ8WVF2 138 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 LPGAT1Q92604 370 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 PPP2R3CQ969Q6 453 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 MRPL1Q9BYD6 325 aaKnown RBP16.16■□□□□ 0.18
UBE3D-201ENST00000237186 KLHL4Q9C0H6 718 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 TRPM5Q9NZQ8 1165 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 C6orf203Q9P0P8 240 aaPredicted RBP16.16■□□□□ 0.18
UBE3D-201ENST00000237186 STOML2Q9UJZ1 356 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 PSMD13Q9UNM6 376 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 MED16Q9Y2X0 877 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 GREB1Q4ZG55 1949 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 LCHNA4D1U4 455 aa16.15■□□□□ 0.18
UBE3D-201ENST00000237186 C2orf81A6NN90 581 aa16.15■□□□□ 0.18
UBE3D-201ENST00000237186 RHOCP08134 193 aa16.15■□□□□ 0.18
UBE3D-201ENST00000237186 PIRTP0C851 137 aa16.15■□□□□ 0.18
UBE3D-201ENST00000237186 RAG1P15918 1043 aa16.15■□□□□ 0.18
UBE3D-201ENST00000237186 ME2P23368 584 aa16.15■□□□□ 0.18
UBE3D-201ENST00000237186 DPP6P42658 865 aa16.15■□□□□ 0.18
UBE3D-201ENST00000237186 ACADVLP49748 655 aa16.15■□□□□ 0.18
UBE3D-201ENST00000237186 SCNN1BP51168 640 aa16.15■□□□□ 0.18
UBE3D-201ENST00000237186 RPL26P61254 145 aaKnown RBP16.15■□□□□ 0.18
UBE3D-201ENST00000237186 SETMARQ53H47 684 aaPredicted RBP16.15■□□□□ 0.18
UBE3D-201ENST00000237186 ZFP1Q6P2D0 407 aa16.15■□□□□ 0.18
UBE3D-201ENST00000237186 ZNF783Q6ZMS7 281 aa16.15■□□□□ 0.18
UBE3D-201ENST00000237186 TMEM126BQ8IUX1 230 aa16.15■□□□□ 0.18
UBE3D-201ENST00000237186 PLCD3Q8N3E9 789 aa16.15■□□□□ 0.18
UBE3D-201ENST00000237186 ZNF461Q8TAF7 563 aa16.15■□□□□ 0.18
UBE3D-201ENST00000237186 KIAA1191Q96A73 305 aa16.15■□□□□ 0.18
UBE3D-201ENST00000237186 TRMT2BQ96GJ1 504 aaKnown RBP16.15■□□□□ 0.18
UBE3D-201ENST00000237186 MARK4Q96L34 752 aa16.15■□□□□ 0.18
UBE3D-201ENST00000237186 CLSTN3Q9BQT9 956 aa16.15■□□□□ 0.18
UBE3D-201ENST00000237186 VN1R3Q9BXE9 311 aa16.15■□□□□ 0.18
UBE3D-201ENST00000237186 KLF16Q9BXK1 252 aaPredicted RBP16.15■□□□□ 0.18
UBE3D-201ENST00000237186 DERL2Q9GZP9 239 aa16.15■□□□□ 0.18
UBE3D-201ENST00000237186 UNC93B1Q9H1C4 597 aa16.15■□□□□ 0.18
UBE3D-201ENST00000237186 VCXQ9H320 206 aa16.15■□□□□ 0.18
UBE3D-201ENST00000237186 MTF2Q9Y483 593 aaPredicted RBP16.15■□□□□ 0.18
UBE3D-201ENST00000237186 CCDC189A1A4V9 331 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 DPPA5A6NC42 116 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 PARNO95453 639 aaKnown RBP16.14■□□□□ 0.17
UBE3D-201ENST00000237186 SEC24AO95486 1093 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 SLC4A1P02730 911 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 ENO3P13929 434 aaPredicted RBP16.14■□□□□ 0.17
UBE3D-201ENST00000237186 CORO1AP31146 461 aaKnown RBP16.14■□□□□ 0.17
UBE3D-201ENST00000237186 ATP6V0D1P61421 351 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 PDAP1Q13442 181 aaKnown RBP16.14■□□□□ 0.17
UBE3D-201ENST00000237186 TPGS2Q68CL5 300 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 TMEM154Q6P9G4 183 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 RPS27LQ71UM5 84 aaKnown RBP16.14■□□□□ 0.17
UBE3D-201ENST00000237186 MDGA1Q8NFP4 955 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 DLG3Q92796 817 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 DDX50Q9BQ39 737 aaKnown RBP16.14■□□□□ 0.17
UBE3D-201ENST00000237186 SCUBE2Q9NQ36 999 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 TAS2R13Q9NYV9 303 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 HACD3Q9P035 362 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 AGO1Q9UL18 857 aaKnown RBP16.14■□□□□ 0.17
UBE3D-201ENST00000237186 VPS9D1Q9Y2B5 631 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 CHD5Q8TDI0 1954 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 H3BMM5 538 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 PSMD12O00232 456 aaPredicted RBP16.14■□□□□ 0.17
UBE3D-201ENST00000237186 GPC4O75487 556 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 BCAS2O75934 225 aaPredicted RBP16.14■□□□□ 0.17
UBE3D-201ENST00000237186 CDK14O94921 469 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 XRCC1P18887 633 aaPredicted RBP16.14■□□□□ 0.17
UBE3D-201ENST00000237186 PPP3CCP48454 512 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 NAA20P61599 178 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 LRP8Q14114 963 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 FLOT2Q14254 428 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 OR4D1Q15615 310 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 GLT6D1Q7Z4J2 308 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 RAB44Q7Z6P3 723 aaPredicted RBP16.14■□□□□ 0.17
UBE3D-201ENST00000237186 PQLC1Q8N2U9 271 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 PTGR2Q8N8N7 351 aaPredicted RBP16.14■□□□□ 0.17
UBE3D-201ENST00000237186 HIPK4Q8NE63 616 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 OR4K2Q8NGD2 314 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 STAG3L4Q8TBR4 150 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 GDPD5Q8WTR4 605 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 RMDN1Q96DB5 314 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 IGSF21Q96ID5 467 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 MRPL40Q9NQ50 206 aaKnown RBP16.14■□□□□ 0.17
UBE3D-201ENST00000237186 GKN1Q9NS71 199 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 SCOCQ9UIL1 159 aa16.14■□□□□ 0.17
UBE3D-201ENST00000237186 ACOT8O14734 319 aa16.13■□□□□ 0.17
UBE3D-201ENST00000237186 CFLARO15519 480 aa16.13■□□□□ 0.17
UBE3D-201ENST00000237186 KERAO60938 352 aa16.13■□□□□ 0.17
UBE3D-201ENST00000237186 LATS1O95835 1130 aa16.13■□□□□ 0.17
UBE3D-201ENST00000237186 MYCP01106 439 aaPredicted RBP16.13■□□□□ 0.17
UBE3D-201ENST00000237186 RPL17P18621 184 aaKnown RBP16.13■□□□□ 0.17
UBE3D-201ENST00000237186 LPOP22079 712 aaPredicted RBP16.13■□□□□ 0.17
UBE3D-201ENST00000237186 SGSHP51688 502 aa16.13■□□□□ 0.17
UBE3D-201ENST00000237186 SH3BP2P78314 561 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms