RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 ADARP55265 1226 aaKnown RBP11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 CACUL1Q86Y37 369 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 TMC8Q8IU68 726 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 WFDC5Q8TCV5 224 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 SIGLEC10Q96LC7 697 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 ZNF778Q96MU6 729 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 SAMD11Q96NU1 681 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 FEM1AQ9BSK4 669 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 CCDC106Q9BWC9 280 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 SLC25A51Q9H1U9 297 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 ZNF358Q9NW07 568 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 MAFFQ9ULX9 164 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 CLEC4EQ9ULY5 219 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 FAF1Q9UNN5 650 aaPredicted RBP11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 POMPQ9Y244 141 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 PCDHB9Q9Y5E1 797 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 ERI2A8K979 691 aaKnown RBP11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 KRT38O76015 456 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 STAMBPO95630 424 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 SEMG2Q02383 582 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 PPM1JQ5JR12 505 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 NXNQ6DKJ4 435 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 FRMD7Q6ZUT3 714 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 ZNF366Q8N895 744 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 LRGUKQ96M69 825 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 DUS2Q9NX74 493 aaKnown RBP11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 PRAMEF11O60813 436 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 FKBP6O75344 327 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 SPAG6O75602 509 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 ZNF189O75820 626 aaPredicted RBP11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 TMCC1O94876 653 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 HNRNPA1P09651 372 aaKnown RBP eCLIP11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 ENO3P13929 434 aaPredicted RBP11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 TYRP14679 529 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 PGAM1P18669 254 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 FSHRP23945 695 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 NUDT2P50583 147 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 PGGT1BP53609 377 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 NIPAL4Q0D2K0 466 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 FCRL5Q96RD9 977 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 UBAP1Q9NZ09 502 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 KIAA1522Q9P206 1035 aaPredicted RBP11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 EVLQ9UI08 416 aaPredicted RBP11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 C5orf42Q9H799 3197 aa11.73□□□□□ -0.53
TNFAIP1-201ENST00000226225 SIN3BO75182 1162 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 TGDSO95455 350 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 TFPTP0C1Z6 253 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 RPL10P27635 214 aaKnown RBP11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 HOXC13P31276 330 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 STK19P49842 368 aaPredicted RBP11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 CDK18Q07002 472 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 PDE1CQ14123 709 aaPredicted RBP11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 ANKRD20A4Q4UJ75 823 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 ATAT1Q5SQI0 421 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 SETD3Q86TU7 594 aaPredicted RBP11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 PNPLA1Q8N8W4 532 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 ZFP28Q8NHY6 868 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 GRIN3AQ8TCU5 1115 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 LRRC39Q96DD0 335 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 DCUN1D1Q96GG9 259 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 IL12RB2Q99665 862 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 DCUN1D5Q9BTE7 237 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 UNKQ9C0B0 810 aaKnown RBP11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 IL22Q9GZX6 179 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 VPS51Q9UID3 782 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 FIS1Q9Y3D6 152 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 IGLV3-10A0A075B6K4 115 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 BOLA2-SMG1P6H3BVE0 249 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 PABPC4LP0CB38 370 aaKnown RBP11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 CTPS1P17812 591 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 NMBRP28336 390 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 CD70P32970 193 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 SERPINH1P50454 418 aaKnown RBP11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 SLC12A2P55011 1212 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 CCDC85BQ15834 202 aaPredicted RBP11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 TCEAL5Q5H9L2 206 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 SPDYAQ5MJ70 313 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 N4BP2L1Q5TBK1 243 aaPredicted RBP11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 PDPK2PQ6A1A2 396 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 GPR65Q8IYL9 337 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 METTL25Q8N6Q8 603 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 SORCS1Q8WY21 1168 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 ZDHHC4Q9NPG8 344 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 ZNF510Q9Y2H8 683 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 STX16-NPEPL1H3BU86 382 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 LINC01565O15544 149 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 FGF19O95750 216 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 DHRS4L1P0CG22 281 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 PAMP19021 973 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 TYK2P29597 1187 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 SLC1A6P48664 564 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 NRG1Q02297 640 aaPredicted RBP11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 MYLK3Q32MK0 819 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 ESRP1Q6NXG1 681 aaKnown RBP11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 B3GNT6Q6ZMB0 384 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 STRA8Q7Z7C7 330 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 FGF13Q92913 245 aa11.72□□□□□ -0.53
TNFAIP1-201ENST00000226225 DGCR14Q96DF8 476 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms