RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 PTCHD4Q6ZW05 846 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 QKIQ96PU8 341 aaKnown RBP eCLIP13.24□□□□□ -0.29
COL1A1-201ENST00000225964 BLOC1S4Q9NUP1 217 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 EXD2Q9NVH0 621 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 C2CD2Q9Y426 696 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 SPATA31C2B4DYI2 1134 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 XKRYO14609 159 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 MDM4O15151 490 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 UGT2B17O75795 530 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 LYNP07948 512 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 CYP4B1P13584 511 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 KCNA5P22460 613 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 PPIGQ13427 754 aaKnown RBP eCLIP13.24□□□□□ -0.29
COL1A1-201ENST00000225964 SEMA5AQ13591 1074 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 RFX4Q33E94 735 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 ZDHHC20Q5W0Z9 365 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 FAM91A1Q658Y4 838 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 DNASE1L2Q92874 299 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 TRIM63Q969Q1 353 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 TCF25Q9BQ70 676 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 PRDM12Q9H4Q4 367 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 SPAG4Q9NPE6 437 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 ABI3Q9P2A4 366 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 CRNNQ9UBG3 495 aaPredicted RBP13.24□□□□□ -0.29
COL1A1-201ENST00000225964 UBIAD1Q9Y5Z9 338 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 VWDEQ8N2E2 1590 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 FGF1P05230 155 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 CDH3P22223 829 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 PDX1P52945 283 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 GTF2BQ00403 316 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 ZNF670Q9BS34 389 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 TBC1D14Q9P2M4 693 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 ZNF490Q9ULM2 529 aaPredicted RBP13.24□□□□□ -0.29
COL1A1-201ENST00000225964 SAMHD1Q9Y3Z3 626 aaKnown RBP13.24□□□□□ -0.29
COL1A1-201ENST00000225964 SLIT1O75093 1534 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 SETD6Q8TBK2 473 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 EPS8L1Q8TE68 723 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 DLG3Q92796 817 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 CNGB3Q9NQW8 809 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 EVLQ9UI08 416 aaPredicted RBP13.23□□□□□ -0.29
COL1A1-201ENST00000225964 TBC1D30Q9Y2I9 924 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 RPL22P35268 128 aaKnown RBP13.23□□□□□ -0.29
COL1A1-201ENST00000225964 LSM3P62310 102 aaKnown RBP13.23□□□□□ -0.29
COL1A1-201ENST00000225964 TAF10Q12962 218 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 RNASE12Q5GAN4 147 aaKnown RBP13.23□□□□□ -0.29
COL1A1-201ENST00000225964 LIPMQ5VYY2 423 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 ZBTB22O15209 634 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 ERBB2P04626 1255 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 CMPK1P30085 196 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 MATKP42679 507 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 GALNT18Q6P9A2 607 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 PEX5LQ8IYB4 626 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 TMEM161BQ8NDZ6 487 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 CLHC1Q8NHS4 586 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 MCRS1Q96EZ8 462 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 FCRL4Q96PJ5 515 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 ING3Q9NXR8 418 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 ASTN1O14525 1302 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 FSBPO95073 299 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 HNRNPLP14866 589 aaKnown RBP eCLIP13.23□□□□□ -0.29
COL1A1-201ENST00000225964 TGFBR2P37173 567 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 FOXM1Q08050 763 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 UBXN2BQ14CS0 331 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 FNBP1LQ5T0N5 605 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 RASSF6Q6ZTQ3 369 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 GALNT7Q86SF2 657 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 MON1AQ86VX9 555 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 CADM2Q8N3J6 435 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 GOLGA2P5Q9HBQ8 144 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 H3BM21 787 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 PTPN9P43378 593 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 SMCO1Q147U7 214 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 UGCGQ16739 394 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 PPP2R2DQ66LE6 453 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 SLC4A11Q8NBS3 891 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 PNPT1Q8TCS8 783 aaKnown RBP13.23□□□□□ -0.29
COL1A1-201ENST00000225964 ADAMTS15Q8TE58 950 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 PTCD2Q8WV60 388 aaKnown RBP13.23□□□□□ -0.29
COL1A1-201ENST00000225964 PACSIN3Q9UKS6 424 aa13.23□□□□□ -0.29
COL1A1-201ENST00000225964 A0A087WXM4 84 aa13.22□□□□□ -0.29
COL1A1-201ENST00000225964 CCDC182A6NF36 153 aa13.22□□□□□ -0.29
COL1A1-201ENST00000225964 DCLK1O15075 740 aa13.22□□□□□ -0.29
COL1A1-201ENST00000225964 UGT2B4P06133 528 aa13.22□□□□□ -0.29
COL1A1-201ENST00000225964 IDSP22304 550 aa13.22□□□□□ -0.29
COL1A1-201ENST00000225964 IL12BP29460 328 aa13.22□□□□□ -0.29
COL1A1-201ENST00000225964 SLC25A3Q00325 362 aa13.22□□□□□ -0.29
COL1A1-201ENST00000225964 RHBDF2Q6PJF5 856 aa13.22□□□□□ -0.29
COL1A1-201ENST00000225964 CLP1Q92989 425 aaKnown RBP13.22□□□□□ -0.29
COL1A1-201ENST00000225964 KAZALD1Q96I82 304 aa13.22□□□□□ -0.29
COL1A1-201ENST00000225964 SPATA9Q9BWV2 254 aa13.22□□□□□ -0.29
COL1A1-201ENST00000225964 RWDD3Q9Y3V2 267 aa13.22□□□□□ -0.29
COL1A1-201ENST00000225964 ALPPL2P10696 532 aa13.22□□□□□ -0.29
COL1A1-201ENST00000225964 ACTR3P61158 418 aa13.22□□□□□ -0.29
COL1A1-201ENST00000225964 SP2Q02086 613 aa13.22□□□□□ -0.29
COL1A1-201ENST00000225964 MINDY4Q4G0A6 757 aa13.22□□□□□ -0.29
COL1A1-201ENST00000225964 BRMS1LQ5PSV4 323 aa13.22□□□□□ -0.29
COL1A1-201ENST00000225964 IRGCQ6NXR0 463 aa13.22□□□□□ -0.29
COL1A1-201ENST00000225964 ZNF730Q6ZMV8 503 aa13.22□□□□□ -0.29
COL1A1-201ENST00000225964 CAMK1DQ8IU85 385 aa13.22□□□□□ -0.29
COL1A1-201ENST00000225964 SLC9A6Q92581 669 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms