RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 PLLPQ9Y342 182 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 LRIG2O94898 1065 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 PTPN2P17706 415 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 DRICH1Q6PGQ1 229 aaPredicted RBP23.15■■□□□ 1.3
TARBP1-201ENST00000040877 CUZD1Q86UP6 607 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 DEPDC4Q8N2C3 294 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 CPT1BQ92523 772 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 COG5Q9UP83 839 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 TBC1D3DA0A087WVF3 549 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 TBC1D3IA0A087WXS9 549 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 TBC1D3EA0A087X179 549 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 TBC1D3KA0A087X1G2 549 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 TBC1D3FA6NER0 549 aaPredicted RBP23.15■■□□□ 1.3
TARBP1-201ENST00000040877 TBC1D3LB9A6J9 549 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 TBC1D3HP0C7X1 549 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 SPATA31D3P0C874 917 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 TBC1D3GQ6DHY5 549 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 TBC1D3CQ6IPX1 549 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 SPATA31D4Q6ZUB0 917 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 CMC1Q7Z7K0 106 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 TBC1D3Q8IZP1 549 aaPredicted RBP23.15■■□□□ 1.3
TARBP1-201ENST00000040877 IQCKQ8N0W5 287 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 DNAJB14Q8TBM8 379 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 SMAD5Q99717 465 aaKnown RBP23.15■■□□□ 1.3
TARBP1-201ENST00000040877 ERVW-1Q9UQF0 538 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 PER2O15055 1255 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 HNRNPLP14866 589 aaKnown RBP eCLIP23.15■■□□□ 1.3
TARBP1-201ENST00000040877 IL10RBQ08334 325 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 RNASEH2BQ5TBB1 312 aaKnown RBP23.15■■□□□ 1.3
TARBP1-201ENST00000040877 CHST9Q7L1S5 443 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 TAC4Q86UU9 113 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 ZC3H7AQ8IWR0 971 aaKnown RBP23.15■■□□□ 1.3
TARBP1-201ENST00000040877 PYDC1Q8WXC3 89 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 TBC1D10AQ9BXI6 508 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 UGT2B4P06133 528 aa23.14■■□□□ 1.3
TARBP1-201ENST00000040877 RHBDF2Q6PJF5 856 aa23.14■■□□□ 1.3
TARBP1-201ENST00000040877 FBXW8Q8N3Y1 598 aa23.14■■□□□ 1.3
TARBP1-201ENST00000040877 LRRN4Q8WUT4 740 aa23.14■■□□□ 1.3
TARBP1-201ENST00000040877 ZNF607Q96SK3 696 aa23.14■■□□□ 1.3
TARBP1-201ENST00000040877 MIR1-1HGQ9H1L0 117 aa23.14■■□□□ 1.3
TARBP1-201ENST00000040877 RFXANKO14593 260 aa23.14■■□□□ 1.3
TARBP1-201ENST00000040877 SLC22A3O75751 556 aa23.14■■□□□ 1.3
TARBP1-201ENST00000040877 NAT16Q8N8M0 369 aa23.14■■□□□ 1.3
TARBP1-201ENST00000040877 AIF1LQ9BQI0 150 aa23.14■■□□□ 1.3
TARBP1-201ENST00000040877 KLHL25Q9H0H3 589 aa23.14■■□□□ 1.3
TARBP1-201ENST00000040877 FZD9O00144 591 aa23.14■■□□□ 1.29
TARBP1-201ENST00000040877 IPO13O94829 963 aaKnown RBP23.14■■□□□ 1.29
TARBP1-201ENST00000040877 POP4O95707 220 aaKnown RBP23.14■■□□□ 1.29
TARBP1-201ENST00000040877 INHAP05111 366 aa23.14■■□□□ 1.29
TARBP1-201ENST00000040877 EPHA3P29320 983 aa23.14■■□□□ 1.29
TARBP1-201ENST00000040877 DGUOKQ16854 277 aa23.14■■□□□ 1.29
TARBP1-201ENST00000040877 RFX4Q33E94 735 aa23.14■■□□□ 1.29
TARBP1-201ENST00000040877 DGKKQ5KSL6 1271 aa23.14■■□□□ 1.29
TARBP1-201ENST00000040877 GPR156Q8NFN8 814 aa23.14■■□□□ 1.29
TARBP1-201ENST00000040877 DNAJC11Q9NVH1 559 aa23.14■■□□□ 1.29
TARBP1-201ENST00000040877 LMO7Q8WWI1 1683 aa23.14■■□□□ 1.29
TARBP1-201ENST00000040877 OTOP3Q7RTS5 596 aa23.14■■□□□ 1.29
TARBP1-201ENST00000040877 PROSER1Q86XN7 944 aa23.14■■□□□ 1.29
TARBP1-201ENST00000040877 OR8H2Q8N162 312 aa23.14■■□□□ 1.29
TARBP1-201ENST00000040877 MARK4Q96L34 752 aa23.14■■□□□ 1.29
TARBP1-201ENST00000040877 TCF12Q99081 682 aa23.14■■□□□ 1.29
TARBP1-201ENST00000040877 HOPXQ9BPY8 73 aaPredicted RBP23.14■■□□□ 1.29
TARBP1-201ENST00000040877 TCAF1Q9Y4C2 921 aa23.14■■□□□ 1.29
TARBP1-201ENST00000040877 ZNF780BQ9Y6R6 833 aa23.14■■□□□ 1.29
TARBP1-201ENST00000040877 NEK5Q6P3R8 708 aa23.13■■□□□ 1.29
TARBP1-201ENST00000040877 PPCDCQ96CD2 204 aa23.13■■□□□ 1.29
TARBP1-201ENST00000040877 FEM1CQ96JP0 617 aa23.13■■□□□ 1.29
TARBP1-201ENST00000040877 TTLL2Q9BWV7 592 aa23.13■■□□□ 1.29
TARBP1-201ENST00000040877 TTYH3Q9C0H2 523 aa23.13■■□□□ 1.29
TARBP1-201ENST00000040877 SEMA6AQ9H2E6 1030 aa23.13■■□□□ 1.29
TARBP1-201ENST00000040877 GSAPA4D1B5 854 aa23.13■■□□□ 1.29
TARBP1-201ENST00000040877 H3BM21 787 aa23.13■■□□□ 1.29
TARBP1-201ENST00000040877 SCNN1AP37088 669 aa23.13■■□□□ 1.29
TARBP1-201ENST00000040877 ZBTB2Q8N680 514 aa23.13■■□□□ 1.29
TARBP1-201ENST00000040877 ERLEC1Q96DZ1 483 aa23.13■■□□□ 1.29
TARBP1-201ENST00000040877 A0A1W2PPM1 405 aa23.13■■□□□ 1.29
TARBP1-201ENST00000040877 SNAP91O60641 907 aa23.13■■□□□ 1.29
TARBP1-201ENST00000040877 CRELD2Q6UXH1 353 aaPredicted RBP23.13■■□□□ 1.29
TARBP1-201ENST00000040877 MOSPD2Q8NHP6 518 aa23.13■■□□□ 1.29
TARBP1-201ENST00000040877 OR52E6Q96RD3 313 aa23.13■■□□□ 1.29
TARBP1-201ENST00000040877 EIF2B3Q9NR50 452 aaKnown RBP23.13■■□□□ 1.29
TARBP1-201ENST00000040877 EVLQ9UI08 416 aaPredicted RBP23.13■■□□□ 1.29
TARBP1-201ENST00000040877 ASB3Q9Y575 518 aa23.13■■□□□ 1.29
TARBP1-201ENST00000040877 CCL16O15467 120 aa23.13■■□□□ 1.29
TARBP1-201ENST00000040877 ERN1O75460 977 aaKnown RBP23.13■■□□□ 1.29
TARBP1-201ENST00000040877 CDK14O94921 469 aa23.13■■□□□ 1.29
TARBP1-201ENST00000040877 NUP62P37198 522 aaPredicted RBP23.13■■□□□ 1.29
TARBP1-201ENST00000040877 RFTN2Q52LD8 501 aaPredicted RBP23.13■■□□□ 1.29
TARBP1-201ENST00000040877 ARMC4Q5T2S8 1044 aa23.13■■□□□ 1.29
TARBP1-201ENST00000040877 CRTC3Q6UUV7 619 aa23.13■■□□□ 1.29
TARBP1-201ENST00000040877 OFCC1Q8IZS5 231 aa23.13■■□□□ 1.29
TARBP1-201ENST00000040877 OR6K2Q8NGY2 324 aa23.13■■□□□ 1.29
TARBP1-201ENST00000040877 SLC38A2Q96QD8 506 aa23.13■■□□□ 1.29
TARBP1-201ENST00000040877 C3orf14Q9HBI5 128 aa23.13■■□□□ 1.29
TARBP1-201ENST00000040877 NEK6Q9HC98 313 aa23.13■■□□□ 1.29
TARBP1-201ENST00000040877 PTPRJQ12913 1337 aa23.13■■□□□ 1.29
TARBP1-201ENST00000040877 ZNF24P17028 368 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 GPAT3Q53EU6 434 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 DSELQ8IZU8 1212 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 CYP4X1Q8N118 509 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms