RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 SULT2A1Q06520 285 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 PRKAA1Q13131 559 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 DGKKQ5KSL6 1271 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 ELMSAN1Q6PJG2 1045 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 ALYREFQ86V81 257 aaKnown RBP14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 TMEM25Q86YD3 366 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 CAMK1DQ8IU85 385 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 EFHBQ8N7U6 833 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 TTC16Q8NEE8 873 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 ANKRD49Q8WVL7 239 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 IRF7Q92985 503 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 ZNF707Q96C28 371 aaPredicted RBP14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 NSL1Q96IY1 281 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 SMIM14Q96QK8 99 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 SLC2A11Q9BYW1 496 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 TM6SF2Q9BZW4 377 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 ATP13A3Q9H7F0 1226 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 TLE6Q9H808 572 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 EVLQ9UI08 416 aaPredicted RBP14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 APOBEC2Q9Y235 224 aaKnown RBP14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 A0A0J9YYE9 177 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 CCDC189A1A4V9 331 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 SLCO1B7G3V0H7 640 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 MGRN1O60291 552 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 NDUFS3O75489 264 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 PRAMEF12O95522 483 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 TRBC1P01850 177 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 CALB2P22676 271 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 PTPN4P29074 926 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 IDH3AP50213 366 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 NAGLUP54802 743 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 SNRPD1P62314 119 aaKnown RBP14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 ELF3P78545 371 aaPredicted RBP14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 XIAPP98170 497 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 PEX6Q13608 980 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 FUT11Q495W5 492 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 CYB5D1Q6P9G0 228 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 EPGNQ6UW88 154 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 KIAA0907Q7Z7F0 614 aaPredicted RBP14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 ISCA2Q86U28 154 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 SLC22A9Q8IVM8 553 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 PLPP6Q8IY26 295 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 SPATA6LQ8N4H0 392 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 ZNF781Q8N8C0 355 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 PNPLA1Q8N8W4 532 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 TXNDC5Q8NBS9 432 aaKnown RBP14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 VOPP1Q96AW1 172 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 CNDP1Q96KN2 507 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 LYSMD1Q96S90 227 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 LBHD1Q9BQE6 289 aaPredicted RBP14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 EBF4Q9BQW3 602 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 CPEB1Q9BZB8 566 aaKnown RBP14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 SYTL2Q9HCH5 934 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 SPHK2Q9NRA0 654 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 ARL8BQ9NVJ2 186 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 FKBPLQ9UIM3 349 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 PKP3Q9Y446 797 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 COMMD10Q9Y6G5 202 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 NOTCH4Q99466 2003 aa14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 ANKRD36A6QL64 1941 aa14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 F8W8V4 182 aa14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 MATN2O00339 956 aa14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 SLC9A3R1O14745 358 aaPredicted RBP14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 ZNF37AP17032 561 aaPredicted RBP14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 SERPINA4P29622 427 aa14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 MC4RP32245 332 aa14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 ERVK-21P61565 698 aa14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 NFKB2Q00653 900 aa14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 GALNT1Q10472 559 aaPredicted RBP14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 RIPK1Q13546 671 aa14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 CDKN3Q16667 212 aa14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 TTC31Q49AM3 519 aaPredicted RBP14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 ARL13AQ5H913 290 aaPredicted RBP14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 METTL21CQ5VZV1 264 aa14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 FBXW10Q5XX13 1052 aa14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 SPRED2Q7Z698 418 aa14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 TTC7BQ86TV6 843 aa14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 LSMEM2Q8N112 164 aa14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 PCDH20Q8N6Y1 951 aaKnown RBP14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 RHEBL1Q8TAI7 183 aa14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 GRIN3AQ8TCU5 1115 aa14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 ECHDC3Q96DC8 303 aa14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 PRR11Q96HE9 360 aaPredicted RBP14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 RAB3IPQ96QF0 476 aaPredicted RBP14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 BBS2Q9BXC9 721 aa14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 NCKIPSDQ9NZQ3 722 aa14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 VTI1BQ9UEU0 232 aa14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 TRIM33Q9UPN9 1127 aa14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 MED16Q9Y2X0 877 aa14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 PPIL1Q9Y3C6 166 aa14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 OAS3Q9Y6K5 1087 aaKnown RBP14.28□□□□□ -0.12
RTFDC1-201ENST00000023939 CAPN8A6NHC0 703 aa14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 IPO13O94829 963 aaKnown RBP14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 PIGNO95427 931 aa14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 PABPC1P11940 636 aaKnown RBP14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 MYOGP15173 224 aa14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 CD1DP15813 335 aa14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 RPL14P50914 215 aaKnown RBP14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 PTPN5P54829 565 aa14.27□□□□□ -0.12
RTFDC1-201ENST00000023939 CACNG1Q06432 222 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms