RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 SPATA5L1Q9BVQ7 753 aa11.08□□□□□ -0.64
RGPD5-201ENST00000016946 SDCBP2Q9H190 292 aa11.08□□□□□ -0.64
RGPD5-201ENST00000016946 NOD2Q9HC29 1040 aa11.08□□□□□ -0.64
RGPD5-201ENST00000016946 ELOVL2Q9NXB9 296 aa11.08□□□□□ -0.64
RGPD5-201ENST00000016946 LEF1Q9UJU2 399 aaPredicted RBP11.08□□□□□ -0.64
RGPD5-201ENST00000016946 FZD10Q9ULW2 581 aa11.08□□□□□ -0.64
RGPD5-201ENST00000016946 DUSP12Q9UNI6 340 aa11.08□□□□□ -0.64
RGPD5-201ENST00000016946 FAM237BA0A1B0GVD1 139 aa11.08□□□□□ -0.64
RGPD5-201ENST00000016946 PAICSP22234 425 aaKnown RBP11.08□□□□□ -0.64
RGPD5-201ENST00000016946 NDUFA9Q16795 377 aa11.08□□□□□ -0.64
RGPD5-201ENST00000016946 RNASEH2BQ5TBB1 312 aaKnown RBP11.08□□□□□ -0.64
RGPD5-201ENST00000016946 LIPMQ5VYY2 423 aa11.08□□□□□ -0.64
RGPD5-201ENST00000016946 SCIMPQ6UWF3 145 aa11.08□□□□□ -0.64
RGPD5-201ENST00000016946 EID3Q8N140 333 aa11.08□□□□□ -0.64
RGPD5-201ENST00000016946 SRFBP1Q8NEF9 429 aaKnown RBP11.08□□□□□ -0.64
RGPD5-201ENST00000016946 BPIFB1Q8TDL5 484 aa11.08□□□□□ -0.64
RGPD5-201ENST00000016946 C8orf48Q96LL4 319 aa11.08□□□□□ -0.64
RGPD5-201ENST00000016946 DCLRE1BQ9H816 532 aa11.08□□□□□ -0.64
RGPD5-201ENST00000016946 CAB39LQ9H9S4 337 aa11.08□□□□□ -0.64
RGPD5-201ENST00000016946 TDP1Q9NUW8 608 aa11.08□□□□□ -0.64
RGPD5-201ENST00000016946 SORCS3Q9UPU3 1222 aa11.08□□□□□ -0.64
RGPD5-201ENST00000016946 SNX10Q9Y5X0 201 aa11.08□□□□□ -0.64
RGPD5-201ENST00000016946 COL1A1P02452 1464 aaPredicted RBP11.08□□□□□ -0.64
RGPD5-201ENST00000016946 UBTFL6P0CB48 400 aaPredicted RBP11.08□□□□□ -0.64
RGPD5-201ENST00000016946 SCNN1AP37088 669 aa11.08□□□□□ -0.64
RGPD5-201ENST00000016946 GABRB2P47870 512 aa11.08□□□□□ -0.64
RGPD5-201ENST00000016946 CYP2R1Q6VVX0 501 aa11.08□□□□□ -0.64
RGPD5-201ENST00000016946 SMAD5Q99717 465 aaKnown RBP11.08□□□□□ -0.64
RGPD5-201ENST00000016946 TRIT1Q9H3H1 467 aaKnown RBP11.08□□□□□ -0.64
RGPD5-201ENST00000016946 KNDC1Q76NI1 1749 aa11.08□□□□□ -0.64
RGPD5-201ENST00000016946 PPEF2O14830 753 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 ALPPL2P10696 532 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 GJA1P17302 382 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 CDH3P22223 829 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 POLD2P49005 469 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.07□□□□□ -0.64
RGPD5-201ENST00000016946 RFTN1Q14699 578 aaPredicted RBP11.07□□□□□ -0.64
RGPD5-201ENST00000016946 CCDC142Q17RM4 750 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 FBXL18Q96ME1 805 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 TCAF1Q9Y4C2 921 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 STK16O75716 305 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 RECQL5O94762 991 aaPredicted RBP11.07□□□□□ -0.64
RGPD5-201ENST00000016946 ATG7O95352 703 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 SHBGP04278 402 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 C2P06681 752 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 HNRNPLP14866 589 aaKnown RBP eCLIP11.07□□□□□ -0.64
RGPD5-201ENST00000016946 GNSP15586 552 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 LRPAP1P30533 357 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 CSKP41240 450 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 SQLEQ14534 574 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 ATP13A5Q4VNC0 1218 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 CAPRIN2Q6IMN6 1127 aaKnown RBP11.07□□□□□ -0.64
RGPD5-201ENST00000016946 MREGQ8N565 214 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 POF1BQ8WVV4 589 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 HMGB4Q8WW32 186 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 LCN9Q8WX39 176 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 SIPA1Q96FS4 1042 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 IGSF21Q96ID5 467 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 AARSD1Q9BTE6 412 aaKnown RBP11.07□□□□□ -0.64
RGPD5-201ENST00000016946 OSBPL10Q9BXB5 764 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 SLC4A5Q9BY07 1137 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 ARHGAP39Q9C0H5 1083 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 CCSER2Q9H7U1 834 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 HMGXB4Q9UGU5 601 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 ZNF711Q9Y462 761 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 INSL5Q9Y5Q6 135 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 INPPL1O15357 1258 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 CD48P09326 243 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 PSMC3P17980 439 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 LSM12Q3MHD2 195 aaKnown RBP11.07□□□□□ -0.64
RGPD5-201ENST00000016946 ATXN7L2Q5T6C5 722 aaPredicted RBP11.07□□□□□ -0.64
RGPD5-201ENST00000016946 MBLAC2Q68D91 279 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 RASGEF1CQ8N431 466 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 CLEC4CQ8WTT0 213 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 CNBD2Q96M20 576 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 GPR21Q99679 349 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 MON2Q7Z3U7 1717 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 M0R2N6 131 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 CSF2RAP15509 400 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 OTUD3Q5T2D3 398 aaPredicted RBP11.07□□□□□ -0.64
RGPD5-201ENST00000016946 SYPL2Q5VXT5 272 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 MAMDC4Q6UXC1 1216 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 KIAA0408Q6ZU52 694 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 PCDH20Q8N6Y1 951 aaKnown RBP11.07□□□□□ -0.64
RGPD5-201ENST00000016946 KCTD13Q8WZ19 329 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 HAPLN3Q96S86 360 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 BTBD10Q9BSF8 475 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 ANGPT4Q9Y264 503 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 SQORQ9Y6N5 450 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 LRRC14BA6NHZ5 514 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 BIRC5O15392 142 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 NR2F1P10589 423 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 ADH5P11766 374 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 C1DQ13901 141 aaKnown RBP11.07□□□□□ -0.64
RGPD5-201ENST00000016946 HID1Q8IV36 788 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 HDDC3Q8N4P3 179 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 GDAP2Q9NXN4 497 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 PIK3R1P27986 724 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 IL5RAQ01344 420 aa11.07□□□□□ -0.64
RGPD5-201ENST00000016946 IRF7Q92985 503 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms