RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Cyb5r2Q3KNK3 276 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Serpina3gQ5I2A0 440 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Rftn1Q6A0D4 554 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 RbsnQ80Y56 783 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Ttc34Q8C0Q3 554 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Fmo9Q8C116 539 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Kctd2Q8CEZ0 266 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Nae1Q8VBW6 534 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Mlc1Q8VHK5 382 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Ndufs2Q91WD5 463 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Snx15Q91WE1 337 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Cdc7Q9Z0H0 564 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Net1Q9Z206 595 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Crlf3Q9Z2L7 442 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Adamts20P59511 1906 aa21.2■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Gm7792A0A0J9YU01 481 aa21.2■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Glipr1l3A0A1W2P7V2 236 aa21.2■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Gm3183D3YUJ6 481 aa21.2■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Zfp169E9Q3R6 731 aa21.2■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Vmn1r55E9Q8I6 310 aa21.2■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Rab11fip2G3XA57 512 aa21.2■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Gm3139J3QK78 481 aa21.2■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Gm3106J3QPH3 481 aa21.2■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Dnase1l3O55070 310 aa21.2■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Cyp8b1O88962 500 aa21.2■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 PdgfbP31240 241 aa21.2■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Ptpn5P54830 541 aa21.2■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Bcl2a1cQ0P538 128 aa21.2■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Glp2rQ5IXF8 512 aa21.2■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 PtprrQ62132 656 aa21.2■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Snx31Q6P8Y7 439 aa21.2■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Dhx33Q80VY9 698 aaKnown RBP21.2■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 NemfQ8CCP0 1064 aaKnown RBP21.2■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Mtfr2Q8VED8 361 aa21.2■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Snrnp48Q9D361 337 aa21.2■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Akr1c12Q9JLI0 323 aa21.2■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 PikfyveQ9Z1T6 2097 aa21.2■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Piezo2Q8CD54 2822 aa21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Skint11A7XV14 364 aa21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Gm382B1AXN3 1250 aa21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 PiggD3Z3Y1 983 aa21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Kifc5bE9PUA5 672 aa21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Gm2888K7N746 267 aa21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Krt8P11679 490 aaKnown RBP21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 PrkcdP28867 674 aa21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Hspa4lP48722 838 aa21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Dsc3P55850 896 aa21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Polr3bP59470 1133 aa21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Tial1P70318 392 aaKnown RBP21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Ctps1P70698 591 aa21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Smad4P97471 551 aa21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Spag6Q3V0U9 509 aa21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Zbtb2Q3V3W4 514 aaKnown RBP21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Casc4Q6P2L7 435 aa21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Sort1Q6PHU5 825 aa21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Clptm1lQ8BXA5 539 aa21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Lrrc8cQ8R502 803 aa21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Camk1Q91YS8 374 aa21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Mlf2Q99KX1 247 aa21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Ndc80Q9D0F1 642 aaKnown RBP21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Nsmce1Q9D720 266 aa21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Slc29a1Q9JIM1 460 aa21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Pias4Q9JM05 507 aa21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Gm7173A0A0G2JEB6 3132 aa21.19■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Ebf3O08791 596 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 CtsdP18242 410 aaKnown RBP21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Adh5P28474 374 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Traf2P39429 501 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Psen1P49769 467 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Ntsr2P70310 416 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Shox2P70390 331 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Hsdl2Q2TPA8 490 aaKnown RBP21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Ccdc127Q3TC33 260 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 CenplQ3U3S3 329 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Arglu1Q3UL36 271 aaKnown RBP21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Il10raQ61727 575 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 MelkQ61846 643 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Slc41a1Q8BJA2 512 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 NoboxQ8VIH1 527 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Cttnbp2nlQ99LJ0 638 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Mrpl57Q9CQF8 102 aaKnown RBP21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Aldh7a1Q9DBF1 539 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Ndst3Q9EQH7 873 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Nphs1Q9QZS7 1256 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Vmn1r49Q9WUF1 310 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Nup205A0A0J9YUD5 2061 aaKnown RBP21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Igkv12-98A0A0G2JGF9 115 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Armt1A6H630 439 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Syn1O88935 706 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Man1a1P45700 655 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Atp5bP56480 529 aaKnown RBP21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Nudt18Q3U2V3 323 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Ino80dQ66JY2 873 aaKnown RBP21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Elmo2Q8BHL5 732 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Morc4Q8BMD7 928 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Lrrtm3Q8BZ81 582 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Olfr1325Q8VF43 315 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Tspan1Q99J59 240 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Homer3Q99JP6 356 aa21.18■□□□□ 0.98
Ccdc88a-202ENSMUST00000109477 Mrps22Q9CXW2 359 aa21.18■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms