RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Plod2Q9R0B9 737 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Med20Q9R0X0 212 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 HnrnpfQ9Z2X1 415 aaKnown RBP16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Rundc3aO08576 446 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Cd247P24161 164 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Ecm1Q61508 559 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 R3hcc1lQ8BJM3 775 aaKnown RBP16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Olfr1250Q8VGM3 314 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Olfr575Q8VH16 318 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Reep3Q99KK1 254 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Gm43796A0A0J9YV32 372 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Vmn2r-ps130A0A140T8U3 855 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Zmynd12A2BGJ5 363 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Vmn2r74E9PW21 853 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 BdnfP21237 249 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Arf4P61750 180 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Polr2cP97760 275 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Tbc1d24Q3UUG6 561 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Gm11437Q5QR91 290 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Rundc3bQ6PDC0 408 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Trnp1Q80ZI1 223 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Kctd13Q8BGV7 329 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Vmn1r215Q8R264 300 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 GabarapQ9DCD6 117 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Nacc2Q9DCM7 586 aa16.88■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Man1b1A2AJ15 658 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 2010300C02RikE9Q3M9 1175 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 GsnP13020 780 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Tmprss15P97435 1069 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Osbp2Q5QNQ6 908 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Mfsd3Q5U419 412 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Fbxw2Q60584 422 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Slc25a23Q6GQS1 467 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Clrn3Q8BHH8 226 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Fignl1Q8BPY9 683 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Robo4Q8C310 1012 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Lims2Q91XD2 341 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Dnaaf1Q9D2H9 634 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Krt20Q9D312 431 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Plin4O88492 1403 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 XntrpcF8VQM8 1264 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Ercc2O08811 760 aaKnown RBP16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Bmpr1aP36895 532 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Gm732Q3V0P9 516 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 HecaQ3V1N5 544 aaKnown RBP16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Pabpc5Q8C7D3 381 aaKnown RBP16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Usp45Q8K387 813 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Pla2g15Q8VEB4 412 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 NepnQ9CQ76 512 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Nudt17Q9CWD3 296 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Skint6A7XUZ6 1240 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Adcy1O88444 1118 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Nedd8P29595 81 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Cd9P40240 226 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Kcnab3P97382 249 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 1700061G19RikQ08EE8 705 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Kansl1lQ5DTI6 991 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Usp22Q5DU02 525 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Amigo2Q80ZD9 519 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Q8BHR8 331 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 TwnkQ8CIW5 685 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Rxfp2Q91ZZ5 737 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Pard3bQ9CSB4 1203 aa16.87■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Vmn2r88L7N1W8 857 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 NppbP40753 121 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 GuloP58710 440 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Arl4aP61213 200 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Hdac2P70288 488 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 A4galtQ67BJ4 359 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Olfr23Q7TRX4 325 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Sulf1Q8K007 870 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Ddx39aQ8VDW0 427 aaKnown RBP16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Olfr183Q8VFB9 309 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Usb1Q91W78 267 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Man2c1Q91W89 1039 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Pcdha8Q91Y12 946 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 L2hgdhQ91YP0 464 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Gstt3Q99L20 241 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Ccdc70Q9D9B0 223 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Isca2Q9DCB8 154 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Slc6a14Q9JMA9 638 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 CpqQ9WVJ3 470 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Vmn2r90E9PXJ8 863 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Zfp558E9Q1J0 407 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Vmn2r54K7N649 806 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Dnajb5O89114 348 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Fam167bP17257 162 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 PtpraP18052 829 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Cma1P21844 247 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Lmo2P25801 158 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Slc2a3P32037 493 aaKnown RBP16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Adcyap1r1P70205 496 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Arhgap26Q6ZQ82 814 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Gria3Q9Z2W9 888 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Olfr1247A2AT78 314 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Fbxl18E9PYR1 771 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Cyp4f17G3UW78 524 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 BC024978J3QPC3 361 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 ApoeP08226 311 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Hspa4lP48722 838 aa16.86■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms