RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 ITGALP20701 1170 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 FOXN2P32314 431 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 PBX2P40425 430 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 PTGER3P43115 390 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 TMPRSS15P98073 1019 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 CACNG1Q06432 222 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 STX3Q13277 289 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 CTBP1Q13363 440 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 DLG2Q15700 870 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 CRY1Q16526 586 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 GPR33Q49SQ1 333 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 SPDYAQ5MJ70 313 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 RARS2Q5T160 578 aaKnown RBP9.73□□□□□ -0.85
PHGDH-215ENST00000641371 TPRG1Q6ZUI0 275 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 MTSS1LQ765P7 747 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 PTAR1Q7Z6K3 402 aaPredicted RBP9.73□□□□□ -0.85
PHGDH-215ENST00000641371 CRLF3Q8IUI8 442 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 DENND6AQ8IWF6 608 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 SUGP1Q8IWZ8 645 aaKnown RBP9.73□□□□□ -0.85
PHGDH-215ENST00000641371 YAF2Q8IY57 180 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 RYBPQ8N488 228 aaPredicted RBP9.73□□□□□ -0.85
PHGDH-215ENST00000641371 TTC30BQ8N4P2 665 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 GPATCH11Q8N954 259 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 OR4K2Q8NGD2 314 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 PIH1D2Q8WWB5 315 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 ING5Q8WYH8 240 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 FGF13Q92913 245 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 ZSWIM3Q96MP5 696 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 NECTIN4Q96NY8 510 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 ELAC2Q9BQ52 826 aaKnown RBP9.73□□□□□ -0.85
PHGDH-215ENST00000641371 MRPL57Q9BQC6 102 aaKnown RBP9.73□□□□□ -0.85
PHGDH-215ENST00000641371 HEPHQ9BQS7 1158 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 TM6SF2Q9BZW4 377 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 ZFYVE1Q9HBF4 777 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 MLXIPLQ9NP71 852 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 TAS2R13Q9NYV9 303 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 IL17CQ9P0M4 197 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 DEC1Q9P2X7 70 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 COPG2Q9UBF2 871 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 HECAQ9UBI9 543 aaPredicted RBP9.73□□□□□ -0.85
PHGDH-215ENST00000641371 DKK3Q9UBP4 350 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 EVLQ9UI08 416 aaPredicted RBP9.73□□□□□ -0.85
PHGDH-215ENST00000641371 TMCO1Q9UM00 188 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 ERVW-1Q9UQF0 538 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 VWA7Q9Y334 891 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 ARL5AQ9Y689 179 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 USH1CQ9Y6N9 552 aa9.73□□□□□ -0.85
PHGDH-215ENST00000641371 MKI67P46013 3256 aaKnown RBP9.73□□□□□ -0.85
PHGDH-215ENST00000641371 TSPAN11A1L157 253 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 HEPACAM2A8MVW5 462 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 GOLGA8TH3BQL2 631 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 NRG2O14511 850 aaPredicted RBP9.72□□□□□ -0.85
PHGDH-215ENST00000641371 SCAMP3O14828 347 aaKnown RBP9.72□□□□□ -0.85
PHGDH-215ENST00000641371 S1PR4O95977 384 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 MT-CO1P00395 513 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 ESR1P03372 595 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 PDHA1P08559 390 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 LTA4HP09960 611 aaKnown RBP9.72□□□□□ -0.85
PHGDH-215ENST00000641371 MYL2P10916 166 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 CPA3P15088 417 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 SKIV2L2P42285 1042 aaKnown RBP9.72□□□□□ -0.85
PHGDH-215ENST00000641371 CCNHP51946 323 aaPredicted RBP9.72□□□□□ -0.85
PHGDH-215ENST00000641371 MPP1Q00013 466 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 FCHO2Q0JRZ9 810 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 CCDC15Q0P6D6 951 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 SETDB1Q15047 1291 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 ACAP2Q15057 778 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 ACCSLQ4AC99 568 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 FAM78AQ5JUQ0 283 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 DGKKQ5KSL6 1271 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 ATXN7L2Q5T6C5 722 aaPredicted RBP9.72□□□□□ -0.85
PHGDH-215ENST00000641371 HECTD2Q5U5R9 776 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 CDHR3Q6ZTQ4 885 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 CCDC121Q6ZUS5 278 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 GET4Q7L5D6 327 aaPredicted RBP9.72□□□□□ -0.85
PHGDH-215ENST00000641371 SPRED2Q7Z698 418 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 ADIPOR2Q86V24 386 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 SLC22A9Q8IVM8 553 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 WDR75Q8IWA0 830 aaKnown RBP9.72□□□□□ -0.85
PHGDH-215ENST00000641371 MFSD6LQ8IWD5 586 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 ETFBKMTQ8IXQ9 262 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 MDGA1Q8NFP4 955 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 OR13C4Q8NGS5 318 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 STON2Q8WXE9 905 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 ELSPBP1Q96BH3 223 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 ULK4Q96C45 1275 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 SCRN2Q96FV2 425 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 MCCC1Q96RQ3 725 aaPredicted RBP9.72□□□□□ -0.85
PHGDH-215ENST00000641371 MRPL46Q9H2W6 279 aaKnown RBP9.72□□□□□ -0.85
PHGDH-215ENST00000641371 KDM4CQ9H3R0 1056 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 ACTR5Q9H9F9 607 aaPredicted RBP9.72□□□□□ -0.85
PHGDH-215ENST00000641371 FBXO6Q9NRD1 293 aaPredicted RBP9.72□□□□□ -0.85
PHGDH-215ENST00000641371 POLR3BQ9NW08 1133 aaPredicted RBP9.72□□□□□ -0.85
PHGDH-215ENST00000641371 IL1RAPL1Q9NZN1 696 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 SLC17A6Q9P2U8 582 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 NFKBIL1Q9UBC1 381 aaPredicted RBP9.72□□□□□ -0.85
PHGDH-215ENST00000641371 PLA2G4CQ9UP65 541 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 ACTL7AQ9Y615 435 aa9.72□□□□□ -0.85
PHGDH-215ENST00000641371 TTC24A2A3L6 582 aaPredicted RBP9.71□□□□□ -0.86
PHGDH-215ENST00000641371 CCDC78A2IDD5 438 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms