RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 K7ESM1 405 aa26.71■■□□□ 1.87
VEGFA-231ENST00000640499 PSMD11O00231 422 aa26.71■■□□□ 1.87
VEGFA-231ENST00000640499 PCCBP05166 539 aa26.71■■□□□ 1.87
VEGFA-231ENST00000640499 WNT3AP56704 352 aa26.71■■□□□ 1.87
VEGFA-231ENST00000640499 EIF2B5Q13144 721 aaKnown RBP26.71■■□□□ 1.87
VEGFA-231ENST00000640499 PDE1CQ14123 709 aaPredicted RBP26.71■■□□□ 1.87
VEGFA-231ENST00000640499 ZNF542PQ5EBM4 170 aa26.71■■□□□ 1.87
VEGFA-231ENST00000640499 ANKRD20A2Q5SQ80 823 aa26.71■■□□□ 1.87
VEGFA-231ENST00000640499 SEL1L2Q5TEA6 688 aa26.71■■□□□ 1.87
VEGFA-231ENST00000640499 ANKRD20A1Q5TYW2 823 aa26.71■■□□□ 1.87
VEGFA-231ENST00000640499 ANKRD20A3Q5VUR7 823 aa26.71■■□□□ 1.87
VEGFA-231ENST00000640499 DGLUCYQ7Z3D6 616 aa26.71■■□□□ 1.87
VEGFA-231ENST00000640499 NAXDQ8IW45 347 aa26.71■■□□□ 1.87
VEGFA-231ENST00000640499 CCDC110Q8TBZ0 833 aa26.71■■□□□ 1.87
VEGFA-231ENST00000640499 DTD2Q96FN9 168 aa26.71■■□□□ 1.87
VEGFA-231ENST00000640499 MRGPRX2Q96LB1 330 aa26.71■■□□□ 1.87
VEGFA-231ENST00000640499 MLPHQ9BV36 600 aaPredicted RBP26.71■■□□□ 1.87
VEGFA-231ENST00000640499 FAM153AQ9UHL3 310 aa26.71■■□□□ 1.87
VEGFA-231ENST00000640499 TDRD6O60522 2096 aaKnown RBP26.7■■□□□ 1.87
VEGFA-231ENST00000640499 CLDN7O95471 211 aa26.7■■□□□ 1.86
VEGFA-231ENST00000640499 ATXN1LP0C7T5 689 aaKnown RBP26.7■■□□□ 1.86
VEGFA-231ENST00000640499 EPHA8P29322 1005 aaPredicted RBP26.7■■□□□ 1.86
VEGFA-231ENST00000640499 STC1P52823 247 aa26.7■■□□□ 1.86
VEGFA-231ENST00000640499 GDF10P55107 478 aa26.7■■□□□ 1.86
VEGFA-231ENST00000640499 NDUFAF2Q8N183 169 aa26.7■■□□□ 1.86
VEGFA-231ENST00000640499 APOOQ9BUR5 198 aa26.7■■□□□ 1.86
VEGFA-231ENST00000640499 GBA3Q9H227 469 aa26.7■■□□□ 1.86
VEGFA-231ENST00000640499 RSPH14Q9UHP6 348 aa26.7■■□□□ 1.86
VEGFA-231ENST00000640499 PCOLCE2Q9UKZ9 415 aa26.7■■□□□ 1.86
VEGFA-231ENST00000640499 OR1A2Q9Y585 309 aa26.7■■□□□ 1.86
VEGFA-231ENST00000640499 ARID1BQ8NFD5 2236 aaPredicted RBP26.69■■□□□ 1.86
VEGFA-231ENST00000640499 ENC1O14682 589 aa26.69■■□□□ 1.86
VEGFA-231ENST00000640499 CXCR5P32302 372 aa26.69■■□□□ 1.86
VEGFA-231ENST00000640499 TRIM23P36406 574 aa26.69■■□□□ 1.86
VEGFA-231ENST00000640499 YPEL5P62699 121 aa26.69■■□□□ 1.86
VEGFA-231ENST00000640499 ARHGEF7Q14155 803 aa26.69■■□□□ 1.86
VEGFA-231ENST00000640499 KCTD16Q68DU8 428 aa26.69■■□□□ 1.86
VEGFA-231ENST00000640499 PSAPL1Q6NUJ1 521 aa26.69■■□□□ 1.86
VEGFA-231ENST00000640499 PNCKQ6P2M8 343 aa26.69■■□□□ 1.86
VEGFA-231ENST00000640499 SLC25A45Q8N413 288 aa26.69■■□□□ 1.86
VEGFA-231ENST00000640499 FAM71DQ8N9W8 422 aa26.69■■□□□ 1.86
VEGFA-231ENST00000640499 BAHD1Q8TBE0 780 aaPredicted RBP26.69■■□□□ 1.86
VEGFA-231ENST00000640499 NUS1Q96E22 293 aa26.69■■□□□ 1.86
VEGFA-231ENST00000640499 SPATA13Q96N96 652 aa26.69■■□□□ 1.86
VEGFA-231ENST00000640499 TMEM121Q9BTD3 319 aa26.69■■□□□ 1.86
VEGFA-231ENST00000640499 ADGRE3Q9BY15 652 aa26.69■■□□□ 1.86
VEGFA-231ENST00000640499 SPTBN2O15020 2390 aa26.68■■□□□ 1.86
VEGFA-231ENST00000640499 C5orf60A6NFR6 353 aa26.68■■□□□ 1.86
VEGFA-231ENST00000640499 ZSCAN12O43309 604 aa26.68■■□□□ 1.86
VEGFA-231ENST00000640499 LIASO43766 372 aa26.68■■□□□ 1.86
VEGFA-231ENST00000640499 NDST3O95803 873 aa26.68■■□□□ 1.86
VEGFA-231ENST00000640499 PIRTP0C851 137 aa26.68■■□□□ 1.86
VEGFA-231ENST00000640499 NFKBIAP25963 317 aa26.68■■□□□ 1.86
VEGFA-231ENST00000640499 ARRB1P49407 418 aaPredicted RBP26.68■■□□□ 1.86
VEGFA-231ENST00000640499 MTM1Q13496 603 aa26.68■■□□□ 1.86
VEGFA-231ENST00000640499 OASLQ15646 514 aaKnown RBP26.68■■□□□ 1.86
VEGFA-231ENST00000640499 PPM1JQ5JR12 505 aa26.68■■□□□ 1.86
VEGFA-231ENST00000640499 ESRP1Q6NXG1 681 aaKnown RBP26.68■■□□□ 1.86
VEGFA-231ENST00000640499 OXR1Q8N573 874 aa26.68■■□□□ 1.86
VEGFA-231ENST00000640499 C1orf54Q8WWF1 131 aa26.68■■□□□ 1.86
VEGFA-231ENST00000640499 WDR24Q96S15 920 aa26.68■■□□□ 1.86
VEGFA-231ENST00000640499 ABCG8Q9H221 673 aa26.68■■□□□ 1.86
VEGFA-231ENST00000640499 UCKL1Q9NWZ5 548 aa26.68■■□□□ 1.86
VEGFA-231ENST00000640499 SPO11Q9Y5K1 396 aa26.68■■□□□ 1.86
VEGFA-231ENST00000640499 TOR1BO14657 336 aa26.67■■□□□ 1.86
VEGFA-231ENST00000640499 SDC3O75056 442 aa26.67■■□□□ 1.86
VEGFA-231ENST00000640499 SOD1P00441 154 aa26.67■■□□□ 1.86
VEGFA-231ENST00000640499 EPOP01588 193 aa26.67■■□□□ 1.86
VEGFA-231ENST00000640499 CSF2P04141 144 aa26.67■■□□□ 1.86
VEGFA-231ENST00000640499 GIMD1P0DJR0 217 aa26.67■■□□□ 1.86
VEGFA-231ENST00000640499 CEACAM1P13688 526 aa26.67■■□□□ 1.86
VEGFA-231ENST00000640499 ZNF30P17039 623 aa26.67■■□□□ 1.86
VEGFA-231ENST00000640499 PSMB4P28070 264 aa26.67■■□□□ 1.86
VEGFA-231ENST00000640499 CHRNA4P43681 627 aa26.67■■□□□ 1.86
VEGFA-231ENST00000640499 NOVA1P51513 510 aaKnown RBP26.67■■□□□ 1.86
VEGFA-231ENST00000640499 ZNF569Q5MCW4 686 aa26.67■■□□□ 1.86
VEGFA-231ENST00000640499 KLHDC8BQ8IXV7 354 aa26.67■■□□□ 1.86
VEGFA-231ENST00000640499 SLC35F6Q8N357 371 aa26.67■■□□□ 1.86
VEGFA-231ENST00000640499 SETD7Q8WTS6 366 aaKnown RBP26.67■■□□□ 1.86
VEGFA-231ENST00000640499 IFT43Q96FT9 208 aa26.67■■□□□ 1.86
VEGFA-231ENST00000640499 LGR4Q9BXB1 951 aa26.67■■□□□ 1.86
VEGFA-231ENST00000640499 TCEAL2Q9H3H9 227 aaPredicted RBP26.67■■□□□ 1.86
VEGFA-231ENST00000640499 CD84Q9UIB8 345 aa26.67■■□□□ 1.86
VEGFA-231ENST00000640499 FLRT2O43155 660 aa26.66■■□□□ 1.86
VEGFA-231ENST00000640499 SIRPB2Q5JXA9 342 aa26.66■■□□□ 1.86
VEGFA-231ENST00000640499 LYSMD3Q7Z3D4 306 aa26.66■■□□□ 1.86
VEGFA-231ENST00000640499 PARGQ86W56 976 aa26.66■■□□□ 1.86
VEGFA-231ENST00000640499 SCAMP4Q969E2 229 aa26.66■■□□□ 1.86
VEGFA-231ENST00000640499 AGAP2Q99490 1192 aa26.66■■□□□ 1.86
VEGFA-231ENST00000640499 MAGEE1Q9HCI5 957 aa26.66■■□□□ 1.86
VEGFA-231ENST00000640499 DNAJC28Q9NX36 388 aa26.66■■□□□ 1.86
VEGFA-231ENST00000640499 JRKLQ9Y4A0 524 aa26.66■■□□□ 1.86
VEGFA-231ENST00000640499 C1orf232A0A0U1RR37 186 aa26.65■■□□□ 1.86
VEGFA-231ENST00000640499 SPAARA0A1B0GVQ0 90 aa26.65■■□□□ 1.86
VEGFA-231ENST00000640499 AURKAO14965 403 aa26.65■■□□□ 1.86
VEGFA-231ENST00000640499 YKT6O15498 198 aa26.65■■□□□ 1.86
VEGFA-231ENST00000640499 PIAS2O75928 621 aa26.65■■□□□ 1.86
VEGFA-231ENST00000640499 METTL18O95568 372 aa26.65■■□□□ 1.86
VEGFA-231ENST00000640499 AGTP01019 485 aa26.65■■□□□ 1.86
VEGFA-231ENST00000640499 NME1P15531 152 aaKnown RBP26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms