RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 CROTQ9UKG9 612 aa13.63□□□□□ -0.23
SCARB2-215ENST00000639145 COX7A2P14406 83 aa13.63□□□□□ -0.23
SCARB2-215ENST00000639145 LBPP18428 481 aa13.63□□□□□ -0.23
SCARB2-215ENST00000639145 ITPKAP23677 461 aa13.63□□□□□ -0.23
SCARB2-215ENST00000639145 MLLT6P55198 1093 aaPredicted RBP13.63□□□□□ -0.23
SCARB2-215ENST00000639145 VAC14Q08AM6 782 aa13.63□□□□□ -0.23
SCARB2-215ENST00000639145 SLC10A7Q0GE19 358 aa13.63□□□□□ -0.23
SCARB2-215ENST00000639145 UBE2R2Q712K3 238 aaPredicted RBP13.63□□□□□ -0.23
SCARB2-215ENST00000639145 HOMEZQ8IX15 550 aa13.63□□□□□ -0.23
SCARB2-215ENST00000639145 CYB5D2Q8WUJ1 264 aa13.63□□□□□ -0.23
SCARB2-215ENST00000639145 ASB2Q96Q27 587 aa13.63□□□□□ -0.23
SCARB2-215ENST00000639145 GPR21Q99679 349 aa13.63□□□□□ -0.23
SCARB2-215ENST00000639145 TMCC3Q9ULS5 477 aa13.63□□□□□ -0.23
SCARB2-215ENST00000639145 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.63□□□□□ -0.23
SCARB2-215ENST00000639145 ZNF623O75123 536 aa13.63□□□□□ -0.23
SCARB2-215ENST00000639145 ALBP02768 609 aa13.63□□□□□ -0.23
SCARB2-215ENST00000639145 SH3BGRP55822 239 aaPredicted RBP13.63□□□□□ -0.23
SCARB2-215ENST00000639145 PRKG2Q13237 762 aa13.63□□□□□ -0.23
SCARB2-215ENST00000639145 KRT78Q8N1N4 520 aa13.63□□□□□ -0.23
SCARB2-215ENST00000639145 TIFAQ96CG3 184 aa13.63□□□□□ -0.23
SCARB2-215ENST00000639145 TMEM237Q96Q45 408 aa13.63□□□□□ -0.23
SCARB2-215ENST00000639145 TRMT61BQ9BVS5 477 aaKnown RBP13.63□□□□□ -0.23
SCARB2-215ENST00000639145 CCDC134Q9H6E4 229 aa13.63□□□□□ -0.23
SCARB2-215ENST00000639145 SLC40A1Q9NP59 571 aa13.63□□□□□ -0.23
SCARB2-215ENST00000639145 ARIH1Q9Y4X5 557 aaPredicted RBP13.63□□□□□ -0.23
SCARB2-215ENST00000639145 TOGARAM1Q9Y4F4 1720 aa13.63□□□□□ -0.23
SCARB2-215ENST00000639145 NHSL1Q5SYE7 1610 aa13.63□□□□□ -0.23
SCARB2-215ENST00000639145 RASGRP1O95267 797 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 IFNA16P05015 189 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 CAPZA2P47755 286 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 C21orf59P57076 290 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 ATP6V0D1P61421 351 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 SKP1P63208 163 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 IRAK1BP1Q5VVH5 260 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 LYPLAL1Q5VWZ2 237 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 ATXN2LQ8WWM7 1075 aaKnown RBP13.62□□□□□ -0.23
SCARB2-215ENST00000639145 ATG10Q9H0Y0 220 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 XYLT2Q9H1B5 865 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 SNX6Q9UNH7 406 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 ERVW-1Q9UQF0 538 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 ENTPD4Q9Y227 616 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 ERAL1O75616 437 aaKnown RBP13.62□□□□□ -0.23
SCARB2-215ENST00000639145 METTL18O95568 372 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 LRPAP1P30533 357 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 HOXA11P31270 313 aaPredicted RBP13.62□□□□□ -0.23
SCARB2-215ENST00000639145 RFC2P35250 354 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 ACVRL1P37023 503 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 SCTRP47872 440 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 DAB2P98082 770 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 OGDHQ02218 1023 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 ASTE1Q2TB18 679 aaPredicted RBP13.62□□□□□ -0.23
SCARB2-215ENST00000639145 AP5B1Q2VPB7 878 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 MBLAC2Q68D91 279 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 OLFML1Q6UWY5 402 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 CYP2R1Q6VVX0 501 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 PHYKPLQ8IUZ5 450 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 BBS7Q8IWZ6 715 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 PCDH20Q8N6Y1 951 aaKnown RBP13.62□□□□□ -0.23
SCARB2-215ENST00000639145 ACMSDQ8TDX5 336 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 STYXQ8WUJ0 223 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 GPR32O75388 356 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 PDE5AO76074 875 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 NUDT17P0C025 328 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 HAPLN1P10915 354 aaPredicted RBP13.62□□□□□ -0.23
SCARB2-215ENST00000639145 TSHRP16473 764 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 UPP1Q16831 310 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 PPM1JQ5JR12 505 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 TCHHL1Q5QJ38 904 aaPredicted RBP13.62□□□□□ -0.23
SCARB2-215ENST00000639145 ATAD3BQ5T9A4 648 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 OSCP1Q8WVF1 389 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 HMGB4Q8WW32 186 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 DPEP2Q9H4A9 486 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 EXOSC4Q9NPD3 245 aaKnown RBP13.62□□□□□ -0.23
SCARB2-215ENST00000639145 PSME2Q9UL46 239 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 PSMD13Q9UNM6 376 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 CITO14578 2027 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 VIRMAQ69YN4 1812 aaKnown RBP13.62□□□□□ -0.23
SCARB2-215ENST00000639145 A0A088AWK7 358 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 NUDT14O95848 222 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 ZNF10P21506 573 aaPredicted RBP13.62□□□□□ -0.23
SCARB2-215ENST00000639145 CXCR2P25025 360 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 NMBRP28336 390 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 TRAF2Q12933 501 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 PDGFRLQ15198 375 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 HECTD2Q5U5R9 776 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.62□□□□□ -0.23
SCARB2-215ENST00000639145 GPRIN3Q6ZVF9 776 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 CFAP206Q8IYR0 622 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 CMASQ8NFW8 434 aaPredicted RBP13.62□□□□□ -0.23
SCARB2-215ENST00000639145 NTAN1Q96AB6 310 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 C8orf48Q96LL4 319 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 NSMCE2Q96MF7 247 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 KCTD14Q9BQ13 255 aaPredicted RBP13.62□□□□□ -0.23
SCARB2-215ENST00000639145 C1orf50Q9BV19 199 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 C12orf65Q9H3J6 166 aaKnown RBP13.62□□□□□ -0.23
SCARB2-215ENST00000639145 RXFP1Q9HBX9 757 aa13.62□□□□□ -0.23
SCARB2-215ENST00000639145 LYPLA1O75608 230 aaPredicted RBP13.61□□□□□ -0.23
SCARB2-215ENST00000639145 HGFP14210 728 aa13.61□□□□□ -0.23
SCARB2-215ENST00000639145 NQO1P15559 274 aaKnown RBP13.61□□□□□ -0.23
SCARB2-215ENST00000639145 EPHA3P29320 983 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms