RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 EI24O14681 340 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 ACOX3O15254 700 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 ATP6V1G1O75348 118 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 SNAI1O95863 264 aaPredicted RBP10.93□□□□□ -0.66
SNIP1-204ENST00000638725 MTHFD1P11586 935 aaKnown RBP10.93□□□□□ -0.66
SNIP1-204ENST00000638725 CD247P20963 164 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 IL10P22301 178 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 PSMA4P25789 261 aaKnown RBP10.93□□□□□ -0.66
SNIP1-204ENST00000638725 VARSP26640 1264 aaKnown RBP10.93□□□□□ -0.66
SNIP1-204ENST00000638725 IREB2P48200 963 aaKnown RBP10.93□□□□□ -0.66
SNIP1-204ENST00000638725 LEPRP48357 1165 aaKnown RBP10.93□□□□□ -0.66
SNIP1-204ENST00000638725 CCT8P50990 548 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 FOXA1P55317 472 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 WNT3AP56704 352 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 SH3BP2P78314 561 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 ATP6AP1Q15904 470 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 GEN1Q17RS7 908 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 TMEM26Q6ZUK4 368 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 ANKRD23Q86SG2 305 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 ADGRG5Q8IZF4 528 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 LRRC43Q8N309 656 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 PTERQ96BW5 349 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 PPP1R14BQ96C90 147 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 COG8Q96MW5 612 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 TRIM15Q9C019 465 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 PAIP1Q9H074 479 aaKnown RBP10.93□□□□□ -0.66
SNIP1-204ENST00000638725 SOX17Q9H6I2 414 aaPredicted RBP10.93□□□□□ -0.66
SNIP1-204ENST00000638725 VWA7Q9Y334 891 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 TRIM64A6NGJ6 449 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 UNCXA6NJT0 531 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 MEIS3P2A8K0S8 358 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 PIP5K1BO14986 540 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 ANGPT2O15123 496 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 ARPC2O15144 300 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 CLOCKO15516 846 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 SIX3O95343 332 aaPredicted RBP10.93□□□□□ -0.66
SNIP1-204ENST00000638725 SMIM10L2AP0DMW4 78 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 SMIM10L2BP0DMW5 78 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 HSD17B1P14061 328 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 TPP2P29144 1249 aaPredicted RBP10.93□□□□□ -0.66
SNIP1-204ENST00000638725 YAP1P46937 504 aaKnown RBP10.93□□□□□ -0.66
SNIP1-204ENST00000638725 APLP1P51693 650 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 RAB39AQ14964 217 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 SLC14A2Q15849 920 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 AARS2Q5JTZ9 985 aaKnown RBP10.93□□□□□ -0.66
SNIP1-204ENST00000638725 LCN8Q6JVE9 175 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 FASTKD5Q7L8L6 764 aaKnown RBP10.93□□□□□ -0.66
SNIP1-204ENST00000638725 ISCA2Q86U28 154 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 IFNEQ86WN2 208 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 OR52K2Q8NGK3 314 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 GIPC3Q8TF64 312 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 HDAC10Q969S8 669 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 THAP11Q96EK4 314 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 L3HYPDHQ96EM0 354 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 TSPAN17Q96FV3 270 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 FEM1CQ96JP0 617 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 MYRFLQ96LU7 910 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 KCNA7Q96RP8 456 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 HOPXQ9BPY8 73 aaPredicted RBP10.93□□□□□ -0.66
SNIP1-204ENST00000638725 TRMOQ9BU70 441 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 C9orf16Q9BUW7 83 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 PRKD2Q9BZL6 878 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 POLR1BQ9H9Y6 1135 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 TBC1D13Q9NVG8 400 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 CDH7Q9ULB5 785 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 NDUFAF1Q9Y375 327 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 ZNF711Q9Y462 761 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 LTBP3Q9NS15 1303 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 OR51F1A6NGY5 319 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 RRN3P2A6NIE6 340 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 ZNF701M0R085 212 aaPredicted RBP10.92□□□□□ -0.66
SNIP1-204ENST00000638725 SLC6A2P23975 617 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 HMOX2P30519 316 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 AXLP30530 894 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 NAA20P61599 178 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 FGD3Q5JSP0 725 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 CHST15Q7LFX5 561 aaPredicted RBP10.92□□□□□ -0.66
SNIP1-204ENST00000638725 ZBTB46Q86UZ6 589 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 CLYBLQ8N0X4 340 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 RYBPQ8N488 228 aaPredicted RBP10.92□□□□□ -0.66
SNIP1-204ENST00000638725 MINDY1Q8N5J2 469 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 CALML6Q8TD86 181 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 TWIST2Q8WVJ9 160 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 SEPT8Q92599 483 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 CENPNQ96H22 339 aaPredicted RBP10.92□□□□□ -0.66
SNIP1-204ENST00000638725 TBCCD1Q9NVR7 557 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 ACTR3BQ9P1U1 418 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 KCNH4Q9UQ05 1017 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 FADS3Q9Y5Q0 445 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 INPP4BO15327 924 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 CDK14O94921 469 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 SLC4A1P02730 911 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 MT-ND1P03886 318 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 GFAPP14136 432 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 PSMD7P51665 324 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 ARSDP51689 593 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 MAPK10P53779 464 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 CYP51A1Q16850 503 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 XKR5Q6UX68 686 aa10.92□□□□□ -0.66
SNIP1-204ENST00000638725 SPRED1Q7Z699 444 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms