RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 POTEHQ6S545 545 aa18.51■□□□□ 0.55
SCARB2-213ENST00000638680 SPATA19Q7Z5L4 167 aa18.51■□□□□ 0.55
SCARB2-213ENST00000638680 EXOC2Q96KP1 924 aa18.51■□□□□ 0.55
SCARB2-213ENST00000638680 TMEM165Q9HC07 324 aa18.51■□□□□ 0.55
SCARB2-213ENST00000638680 POLR2EP19388 210 aaKnown RBP18.51■□□□□ 0.55
SCARB2-213ENST00000638680 TPSB2P20231 275 aa18.51■□□□□ 0.55
SCARB2-213ENST00000638680 MYL9P24844 172 aa18.51■□□□□ 0.55
SCARB2-213ENST00000638680 PTPN5P54829 565 aa18.51■□□□□ 0.55
SCARB2-213ENST00000638680 TPSAB1Q15661 275 aa18.51■□□□□ 0.55
SCARB2-213ENST00000638680 ADAM2Q99965 735 aa18.51■□□□□ 0.55
SCARB2-213ENST00000638680 CADM1Q9BY67 442 aaKnown RBP18.51■□□□□ 0.55
SCARB2-213ENST00000638680 TM6SF2Q9BZW4 377 aa18.51■□□□□ 0.55
SCARB2-213ENST00000638680 PCDHB12Q9Y5F1 795 aa18.51■□□□□ 0.55
SCARB2-213ENST00000638680 CHRNGP07510 517 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 PEX2P28328 305 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 C16orf62Q7Z3J2 963 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 RALGPS2Q86X27 583 aaPredicted RBP18.5■□□□□ 0.55
SCARB2-213ENST00000638680 DENND1CQ8IV53 801 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 CPSF7Q8N684 471 aaKnown RBP18.5■□□□□ 0.55
SCARB2-213ENST00000638680 PDCD10Q9BUL8 212 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 C2orf49Q9BVC5 232 aaPredicted RBP18.5■□□□□ 0.55
SCARB2-213ENST00000638680 ING3Q9NXR8 418 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 LGALS13Q9UHV8 139 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 RBMX2Q9Y388 322 aaKnown RBP18.5■□□□□ 0.55
SCARB2-213ENST00000638680 RPTORQ8N122 1335 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 XYLT1Q86Y38 959 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 PGAM4Q8N0Y7 254 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 TMEM109Q9BVC6 243 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 DNMT3LQ9UJW3 386 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 CAPGP40121 348 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 WNT3AP56704 352 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 REP15Q6BDI9 236 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 RFWD3Q6PCD5 774 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 THAP5Q7Z6K1 395 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 SATL1Q86VE3 508 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 GALNT8Q9NY28 637 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 FAM149AA5PLN7 773 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 CTPS1P17812 591 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 MC4RP32245 332 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 BEX3Q00994 111 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 TRIM32Q13049 653 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 BIKQ13323 160 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 ANKRD22Q5VYY1 191 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 CLHC1Q8NHS4 586 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 COX4I2Q96KJ9 171 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 TRMOQ9BU70 441 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 LHX5Q9H2C1 402 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 RASSF1Q9NS23 344 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 GJB1P08034 283 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 LPOP22079 712 aaPredicted RBP18.5■□□□□ 0.55
SCARB2-213ENST00000638680 RHAGQ02094 409 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 CDK18Q07002 472 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 ABRQ12979 859 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 LYPLAL1Q5VWZ2 237 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 TEX47Q8TBZ9 253 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 KLHL32Q96NJ5 620 aa18.5■□□□□ 0.55
SCARB2-213ENST00000638680 MMP8P22894 467 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 JAM2P57087 298 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 FUT2Q10981 343 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 FBXL19Q6PCT2 694 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 MON1BQ7L1V2 547 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 TDRD1Q9BXT4 1180 aaKnown RBP18.49■□□□□ 0.55
SCARB2-213ENST00000638680 IPO13O94829 963 aaKnown RBP18.49■□□□□ 0.55
SCARB2-213ENST00000638680 ITGB5P18084 799 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 KLRC2P26717 231 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 RPL3P39023 403 aaKnown RBP18.49■□□□□ 0.55
SCARB2-213ENST00000638680 POLR2JP52435 117 aaKnown RBP18.49■□□□□ 0.55
SCARB2-213ENST00000638680 COPZ1P61923 177 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 C12orf56Q8IXR9 622 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 ZFP28Q8NHY6 868 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 NKX2-3Q8TAU0 364 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 NXNL1Q96CM4 212 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 CXCL11O14625 94 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 KPNA5O15131 536 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 FARP2O94887 1054 aaPredicted RBP18.49■□□□□ 0.55
SCARB2-213ENST00000638680 VPS26BQ4G0F5 336 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 HECTD2Q5U5R9 776 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 ARRDC4Q8NCT1 418 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 RNASE11Q8TAA1 199 aaKnown RBP18.49■□□□□ 0.55
SCARB2-213ENST00000638680 B3GNT5Q9BYG0 378 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 CCDC162PA2VCL2 907 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 PTGIRP43119 386 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 SEPHS1P49903 392 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 TAF13Q15543 124 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 CXXC5Q7LFL8 322 aaKnown RBP18.49■□□□□ 0.55
SCARB2-213ENST00000638680 SLC34A3Q8N130 599 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 LRTOMTQ8WZ04 291 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 S100A13Q99584 98 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 TINF2Q9BSI4 451 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 FAIM2Q9BWQ8 316 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 RHOBTB2Q9BYZ6 727 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 C8orf4Q9NR00 106 aa18.49■□□□□ 0.55
SCARB2-213ENST00000638680 SAMD4AQ9UPU9 718 aaKnown RBP18.49■□□□□ 0.55
SCARB2-213ENST00000638680 A0A088AWK7 358 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 ZNF10P21506 573 aaPredicted RBP18.48■□□□□ 0.55
SCARB2-213ENST00000638680 SNRPD1P62314 119 aaKnown RBP18.48■□□□□ 0.55
SCARB2-213ENST00000638680 DSG4Q86SJ6 1040 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 PPM1MQ96MI6 270 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 CPXM1Q96SM3 734 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 CCNKO75909 580 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms